Zeus faber (John dory): 307238619
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Entry
307238619 CDS
T12102
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
zfa Zeus faber (John dory)
Pathway
zfa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zfa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
307238619 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zfa03019
]
307238619 (ndc1)
Messenger RNA biogenesis [BR:
zfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
307238619 (ndc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
307238619
NCBI-ProteinID:
XP_079867806
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All DBs
Position
12:19841403..19852618
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AA seq
671 aa
AA seq
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MFSAERGCWFVRKVICWRAAASIVWAVLLLPPVTAVFVFLSRFSLLHPIHWISECLSLLT
SANAMLSFILLCGVVVVVGFFNLEYYTVIPSIACSKIALLGQLLHPRQFFHSLVHCALGV
IVAWCCAITIGPRYWTLSSLCTSDDGSPQMCLNEYHFVLLLSGAFIGYSHSLLGVIHNMN
YVSFHPVQQYKYLRFKGALPSVVKYSATRAFYAIRNYLVVYFFLGYIPRSWICNTLNLQL
NSSLYPVDTIGGLLDLSLLYHLWISGTFLLLTWYITVLLFRIFLTEVYSFPVQSLFVENT
HQCLPKVLTAKHSMVLKFLALQDLALLSQHSLSQRLEVFSLSQPGGHPHNWNAISGECLS
LLADLTHRLVAHHDTVATNGRAKTQSTGCDKRSSSSDGSEHLLTPRPSVLLRTPALGLSH
PFLGGLQSPVTAPFTPDFDSPFSSPAVRRLAGPASPANAAELLSPWSNTLQSPHVMRRGP
KLWSASTESQSNCSLVSSPASLPSPAPAVCKPSLLAQFLHNRKEQVKRFLSKRVLIMYLF
NKLPEASSQALFADSQSHIWALEGLSHLVAASFSEDQFGVVQTTLPSILSSMLLLQEAVD
RHFKLPHASSKAVRWHCSMGDSSYKTLRFALRATLKTSIYRISSTFREHLNSVKLSAEHR
KRLQHFLDYKE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgttctcggcagagcggggttgttggttcgtgcggaaggtgatatgctggagagctgca
gccagtattgtttgggctgtcttgctgttgccgcccgtcacggccgtctttgtatttctt
agcagattcagtctcctccaccccatccactggatatcagaatgcctttcccttttaaca
agtgccaacgccatgctgtccttcatcctgctctgcggggtggtggtggtggttggtttc
ttcaacctggagtactacacagtcatcccttccattgcctgctccaaaattgccctgttg
gggcagctgctccacccacgtcagtttttccactctctggtccattgtgccctcggcgta
atcgtggcttggtgttgcgccatcaccatcggacccagatattggacactttcttccctt
tgcacatcggatgatggtagccctcagatgtgcctaaacgagtaccactttgtgttactg
ctgtcgggagcgttcatcggctacagtcacagtctgttgggtgtgatccacaacatgaat
tatgtgtccttccaccctgtgcagcaatacaagtatcttcgttttaaaggagctctgcct
tcggtggtgaaatacagcgcaactcgagccttttacgccatcaggaactaccttgttgtt
tatttctttttgggttatattccaagatcatggatctgtaacacattgaatctgcagtta
aacagctctctgtaccccgtcgacaccattggcgggctgctggacctctcattgctctac
cacctgtggatcagtggcaccttcctcctcctcacctggtacatcaccgtacttctcttc
aggatctttctcactgaggtgtacagttttcctgtgcaatccctgtttgttgagaacacc
caccagtgccttcctaaagtcctcaccgccaaacattccatggtattgaagtttttagct
ctgcaggacttagctctgctgtcccagcactccctgtcacaacgcctcgaggtcttcagc
ctcagtcagccaggtggacacccgcacaactggaacgccatcagcggcgagtgcctgtcc
ctcctggctgatctgactcacagactggtcgcgcaccatgacacagtggcgaccaatggc
agagccaagactcagtctaccggctgcgacaagaggtccagctcctccgacggatcagaa
cacctactgacccccaggcccagcgtcctcctgcgcacccctgcgttgggcttgtctcat
cccttcctgggtggccttcagagccctgtgactgcccccttcacccccgactttgacagc
cccttctcctcccccgccgtgcgccgcctcgccggccccgccagccccgccaacgccgcc
gagctgctgtcgccctggagcaacacgctgcagagcccccacgtcatgaggaggggaccc
aaactgtggtccgcctccacggagtcgcagagcaactgcagcctggtctcctctccggcc
tcgctgcccagcccagcgccggccgtctgcaagcccagcctgctggctcagttcctccac
aataggaaggagcaggtcaaaagattcctgtcaaagcgggtgttgatcatgtatttgttc
aacaagctcccagaggcctccagtcaagccctgtttgcagacagccagtctcacatctgg
gctttggaaggcctgtctcacctcgtagcggcctctttctcagaagaccagtttggggtg
gtgcagacgacgcttcccagcatcctcagcagcatgctgctgctgcaggaggcggtggac
cgtcacttcaagctcccccacgcctccagtaaggcggtgcggtggcactgcagcatgggg
gactcgtcgtacaagacgctgcgcttcgctctgagggccacgctgaaaacctccatctac
aggatcagcagcaccttcagggagcacctcaattcggtcaagctgtcggctgagcacagg
aagaggctgcagcacttcctggactacaaggagtga
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