Zeus faber (John dory): 307239108
Help
Entry
307239108 CDS
T12102
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a isoform 1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
zfa Zeus faber (John dory)
Pathway
zfa04137
Mitophagy - animal
zfa04140
Autophagy - animal
zfa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
zfa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
307239108 (hif1aa)
04137 Mitophagy - animal
307239108 (hif1aa)
04148 Efferocytosis
307239108 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zfa03000
]
307239108 (hif1aa)
Transcription factors [BR:
zfa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
307239108 (hif1aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
HIF-1a_CTAD
PAS_11
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
307239108
NCBI-ProteinID:
XP_079868496
LinkDB
All DBs
Position
13:complement(14365001..14384798)
Genome browser
AA seq
751 aa
AA seq
DB search
MDSGTVPEKKRVSSERRKEKSRDAARSRRGKESEVFYELAQQLPLPHSVTSNMDKASIMR
LTISYLRMRKLLGMDEPVASEKETELDAQLNSSYLKALDGFLVVLSEDGDMIYLSENVNK
CLGLAQFDLTGHSVFDYTHPCDQEDLREMLVHRTGPKAKELNTERNFFLRMKCTLTSRGR
TVNVKSATWKVLHCMGHLRVYKGPAELKEPAMPYLVLICDPIPHPSNIEVPLDTKTFLSR
HTLDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSNHLTKTHHNLFVKGQVSTGQY
RMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKTILSLEQTEDVKPMKE
EEEEEQLEDEVEESAQTDEPQATLKDEKAPETDVIKLFTQTLEPRPLVSLYEQLKEMPEA
LTLLAPAAGDTIIALDFSCPDSDIQLPKDVPLYNDVMLPSTSSKLALPLSPLPPSEPAHG
TSGTSEEAKAEPFTPSPPIAMNSQSSTGPDSPLDFCFPMDSELSSDFKLDLVERLFAIDT
QPKNPFTTQAMEDLDLEMLAPYIPMDDDFQLRTLSPEEPLPCEPEKPVASSPLHLVQEVR
SLPGSPFSAPGSGASSPSPPEPVSTPPPPPAAVLSNRNLQLDKEVSLRMLVAQNAQRKRK
LGELHEVVGIEQGKKLKASETLPPKKVTTRTVLLVPTALASLLLGSTADGNAPPFTLPQL
TRYDCEVNLPMHGRQHLLQGEDLLRALDQVN
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggactcaggaactgtccccgagaagaaaagggtgagctcagagcggaggaaggagaag
tctcgggatgctgcgagatctcggcggggcaaagagtcggaggtgttctacgagttggcc
cagcagctgcccttgccccacagtgtcacctccaacatggacaaggcctccatcatgagg
ctcaccatcagctaccttcgcatgaggaagctgctcggcatggatgagccggtggcgtcg
gagaaggagacggagttggacgcccagctgaacagctcctacctgaaggctctggacggc
ttccttgtggtgctctctgaggacggagacatgatctacctgtctgaaaatgtcaacaag
tgcctgggcctggcacagtttgacctgactggacacagtgtgttcgactacacacacccc
tgtgaccaggaggacctgagagagatgctggtccacagaactggtcccaaagccaaggag
ctgaacacagagcgcaattttttcctgaggatgaagtgtactctcaccagcaggggccgc
actgttaatgtaaagtcggccacttggaaggtgcttcactgtatgggccatttgcgggtg
tacaagggccccgcggagctgaaggagcctgccatgccctacctggtgctgatctgtgac
cccattccacacccctccaacatcgaggtccctctggacacaaagaccttcctcagccgc
cacaccctggacatgaagttcacctattgtgacgagaggattacggagctgatgggctac
gatccagaagatctgctaaatcgctctgtttatgagtactatcatgctctggactcgaac
catctcaccaagacccaccacaacctgtttgtcaagggtcaggtgagcacaggccagtac
cgcatgctggccaaaagaggaggctttgtgtgggtggagacacaggccaccgtcatctac
aacaacaagaattcccagccgcagtgtgtcgtctgcgtcaactttgttctcagtggcatc
caggaggagaagaccatcttgtccctggagcagacagaagatgtgaagcccatgaaggag
gaggaggaggaggagcagctggaggacgaggtggaggagagcgcccagacagacgagccg
caggccacgctgaaggacgagaaagccccggagaccgacgtgatcaagctcttcacccag
accctggagccccgacccctggtcagcctgtacgagcagctgaaggagatgccggaggcc
ctcaccctgctggcccctgccgccggagacaccatcatcgcgctggacttcagctgccca
gattctgacatccagctgccgaaggacgtccccctctacaatgacgtgatgctgccctcc
accagcagcaagctggccctacctctgtctcccctgccgcccagcgagcccgcccacggc
acgagcggcacatccgaggaggccaaagccgagcctttcaccccgtcccctccgattgcc
atgaacagccagagctccacagggcccgacagcccgctggacttctgcttccccatggac
tcggagctgagctcagattttaaactggacttggtagagaggctgttcgccatcgacacc
cagcccaagaatccttttaccacacaggccatggaagacctggatctggagatgctggcg
ccctacatccccatggacgacgacttccagctgcgcacgctgtccccggaggagccttta
ccgtgcgaaccggagaagcccgtggcgagcagccccctgcacctcgtgcaggaagtgcgc
agcttacccggctcccccttcagcgctccaggcagcggcgcgtcttccccctccccgccg
gaaccagtcagtactcctcctcctcctcctgccgccgtgctctccaacagaaatctgcag
ttggacaaagaagtgtccctcaggatgctggtagcacagaacgcacagcgcaaaagaaaa
cttggggagctccatgaggtggtgggaatagaacaaggcaagaagctcaaggcgtctgag
acattaccacctaagaaagtgacgaccaggaccgtcctcctcgtgcccacagcactggca
agcctcctgctgggcagcacggccgacggcaacgcgccccccttcactctcccgcagctc
acgcgctacgactgcgaggtgaacctgcctatgcacggccgccagcacctgctgcagggc
gaggacctgctgcgcgccctggaccaagtcaactag
DBGET
integrated database retrieval system
