Zeus faber (John dory): 307244474
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Entry
307244474 CDS
T12102
Symbol
sox1a
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
zfa Zeus faber (John dory)
Brite
KEGG Orthology (KO) [BR:
zfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zfa03000
]
307244474 (sox1a)
Transcription factors [BR:
zfa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
307244474 (sox1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
307244474
NCBI-ProteinID:
XP_079875775
LinkDB
All DBs
Position
18:complement(<12945930..>12946964)
Genome browser
AA seq
344 aa
AA seq
DB search
MYSMMMETDLHSPGPQTNTATGQTGSNGGSKANQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLSGAGGGGGVGLGVGMSSSGVGQRLESPGGHGGSAGSGYAHMNGWANGAYSGQ
VAAAAAAAAMMQEAQLAYSQHPGSGAHHHHHHSHHHPTHNPQPMHRYDMSALQYSPISNS
QGYMSASPSGYGGIAYTQHQGSGVSSSAAMGTLGSLVKSEPSVSPPVSTHSRGPCPGDLR
EMISMYLPTGEPGDPSVQSRLHALPQHYQSATAGVNGTVPLTHI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggagactgaccttcattcccccggcccccaaacgaacacggcc
acggggcagacggggtcgaacggcgggtccaaagcgaaccaggaccgggtgaagagaccg
atgaacgcgttcatggtgtggtcccggggccagcggcggaagatggcccaggagaacccc
aagatgcacaactcggagatcagcaagaggctgggcgccgagtggaaagtgatgtccgaa
gcggagaagcgccccttcatcgacgaggcgaagcggctgcgcgccatgcacatgaaggag
cacccggattacaagtaccggcccagacggaagaccaaaactctgctgaagaaggacaag
tactccctggccggcggactgttgtctggagcgggcgggggcggcggagtcgggttaggg
gtcggcatgagttcatccggggtcggacagaggttagagagccccgggggccacggaggc
tccgccggctccggctacgcgcacatgaacggctgggcgaacggcgcgtactccggccag
gtggcggcggcggcggccgcggctgcgatgatgcaggaggcgcagctcgcctacagccag
cacccgggcagcggggcgcaccaccaccaccaccactcgcaccaccaccccacgcacaac
ccgcagcccatgcaccgctacgacatgagtgccctgcagtacagccccatctcgaactct
cagggctacatgagcgcctctccgtccggctacgggggcatcgcctacacgcagcaccag
ggctctggggtgtcctcctcggcggccatggggacgttagggtcgctggtgaagtcggag
ccgagcgtaagcccccccgtcagcacacactcacggggtccttgccccggagacttgcga
gagatgataagcatgtatttacccaccggagagccgggggacccgtctgtgcaaagtaga
cttcacgccttgccgcaacattaccagagcgcgacggctggagtaaacggaacggtccct
ctcacacacatttag
DBGET
integrated database retrieval system
