Zeus faber (John dory): 307244706
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Entry
307244706 CDS
T12102
Symbol
LOC307244706
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
zfa Zeus faber (John dory)
Pathway
zfa03013
Nucleocytoplasmic transport
zfa04141
Protein processing in endoplasmic reticulum
zfa04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
zfa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
307244706 (LOC307244706)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
307244706 (LOC307244706)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
307244706 (LOC307244706)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zfa03019
]
307244706 (LOC307244706)
04131 Membrane trafficking [BR:
zfa04131
]
307244706 (LOC307244706)
Messenger RNA biogenesis [BR:
zfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
307244706 (LOC307244706)
Membrane trafficking [BR:
zfa04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
307244706 (LOC307244706)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
307244706 (LOC307244706)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
307244706 (LOC307244706)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
Beta-prop_EIPR1
ANAPC4_WD40
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_NOL10_N
Beta-prop_EML
Beta-prop_WDR41
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
307244706
NCBI-ProteinID:
XP_079876104
LinkDB
All DBs
Position
1:complement(25772933..25779901)
Genome browser
AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVLIWKEENGTWDRMYEYTGHESSVNSVCWGPYDLGLIL
ACGSSDGAISLLTFTGDQQWDVKKISNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWSAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESMDGQWSCIS
DVSKGQGAVSSITDTQQSEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtttccgttatcaacacggtggacacctcgcatgaggacatgattcacgacgcccag
atggactactatggcacgcggctggccacctgctcctccgaccgatcagtgaagatcttc
gatgtgaggaacggagggcagatcctggtggcagacctcagaggccatgagggtcccgtg
tggcaggtggcatgggctcaccccatgtacgggaacatcctggcctcctgctcctatgac
cgcaaagttctaatctggaaagaggagaacggcacctgggatcggatgtacgagtacacc
gggcacgagtcttcagtgaactcggtgtgttggggtccctacgacctggggctgatcctc
gcctgcgggagctcggacggagccatctctctgctcaccttcactggagaccagcagtgg
gacgtcaagaaaatcagcaacgcccacactattggctgtaacgcagtgagctgggctccg
gccgtggtcccaggcagtctgatcgaccagccgtctggacagaagccgaactacgtgaag
cgctttgtttctggaggctgcgacaacctcgtcaaactctggaaggaggaggacggccag
tggaaggaggaccagaagctggaggcgcacagcgactgggtgagggacgtcggctgggct
ccctccattggtctgcccactagcaccatcgccagctgctcccaggacgggcgggtcttt
atctggacgtgcgacgacccggcagggaacacgtggagcgccaagctgctgcataagttc
aacgacgtggtctggcacgtcagctggtccatcacagggaacatcctggctgtgtccgga
ggggacaacaaggtcaccctctggaaggagtccatggacggtcagtggtcgtgtatcagc
gacgtcagtaagggtcagggagcggtgtcctccatcacagacacacagcagagcgagcag
tga
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