KEGG   Zeus faber (John dory): 307244706
Entry
307244706         CDS       T12102                                 
Symbol
LOC307244706
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
zfa  Zeus faber (John dory)
Pathway
zfa03013  Nucleocytoplasmic transport
zfa04141  Protein processing in endoplasmic reticulum
zfa04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:zfa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    307244706 (LOC307244706)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    307244706 (LOC307244706)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    307244706 (LOC307244706)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zfa03019]
    307244706 (LOC307244706)
   04131 Membrane trafficking [BR:zfa04131]
    307244706 (LOC307244706)
Messenger RNA biogenesis [BR:zfa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     307244706 (LOC307244706)
Membrane trafficking [BR:zfa04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    307244706 (LOC307244706)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    307244706 (LOC307244706)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    307244706 (LOC307244706)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta EIF3I Beta-prop_EIPR1 ANAPC4_WD40 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_NOL10_N Beta-prop_EML Beta-prop_WDR41 NBCH_WD40 Beta-prop_WDR36-Utp21_2nd
Other DBs
NCBI-GeneID: 307244706
NCBI-ProteinID: XP_079876104
LinkDB
Position
1:complement(25772933..25779901)
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVLIWKEENGTWDRMYEYTGHESSVNSVCWGPYDLGLIL
ACGSSDGAISLLTFTGDQQWDVKKISNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWSAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESMDGQWSCIS
DVSKGQGAVSSITDTQQSEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttccgttatcaacacggtggacacctcgcatgaggacatgattcacgacgcccag
atggactactatggcacgcggctggccacctgctcctccgaccgatcagtgaagatcttc
gatgtgaggaacggagggcagatcctggtggcagacctcagaggccatgagggtcccgtg
tggcaggtggcatgggctcaccccatgtacgggaacatcctggcctcctgctcctatgac
cgcaaagttctaatctggaaagaggagaacggcacctgggatcggatgtacgagtacacc
gggcacgagtcttcagtgaactcggtgtgttggggtccctacgacctggggctgatcctc
gcctgcgggagctcggacggagccatctctctgctcaccttcactggagaccagcagtgg
gacgtcaagaaaatcagcaacgcccacactattggctgtaacgcagtgagctgggctccg
gccgtggtcccaggcagtctgatcgaccagccgtctggacagaagccgaactacgtgaag
cgctttgtttctggaggctgcgacaacctcgtcaaactctggaaggaggaggacggccag
tggaaggaggaccagaagctggaggcgcacagcgactgggtgagggacgtcggctgggct
ccctccattggtctgcccactagcaccatcgccagctgctcccaggacgggcgggtcttt
atctggacgtgcgacgacccggcagggaacacgtggagcgccaagctgctgcataagttc
aacgacgtggtctggcacgtcagctggtccatcacagggaacatcctggctgtgtccgga
ggggacaacaaggtcaccctctggaaggagtccatggacggtcagtggtcgtgtatcagc
gacgtcagtaagggtcagggagcggtgtcctccatcacagacacacagcagagcgagcag
tga

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