Zeus faber (John dory): 307246760
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Entry
307246760 CDS
T12102
Symbol
cpsf6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform 1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
zfa Zeus faber (John dory)
Pathway
zfa03015
mRNA surveillance pathway
zfa03250
Viral life cycle - HIV-1
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Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
307246760
NCBI-ProteinID:
XP_079878893
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Position
21:complement(12421031..12441318)
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AA seq
581 aa
AA seq
DB search
MADGVDHIDIYADVEEEFNQEADYPVHEQIDLYDDVISPSANNGDAPEDRDYLDTLPAPG
GTEGGKSAPPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAIRTIGITDVLEIKFFENRAN
GQSKGFALVCVGSEVSSRKLMELLSKRELHGQNPIVTPCNKQSLSQFEMQSRKSTQSGQM
SGEGKAGPPGIGPRGFPMGSRGRGRFPGPPGPGGERFPGPIGPGGPPPHFPGSGMRPDLI
RQQDGLLMDMNFNPFSPGGRDGSWRPRGGMQGPPRPPPGPPGPPGPPPPGQGLPPPLSGP
PNRGDRPPPPVLFPGQFGQPPMGPMPPGPPPPGYGPPPGPPPPQQGPPPPGPFPPRPPGP
IGPPMALAPPPHMPGPPPGGPPPAPHVNPAFFPPPGNNNMPPNDNRGPPGPNDPYGRPPP
YERGEYGPGGREMEASRTPLSEAEFEEIMNRNRAISSSAISRAVSDASAADYGSAIETLV
TAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSARRERSRERDHSRSREKSRRHK
SRSRDRHEDYYRERSRERDRHRERDRDRDREREREREYRHR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcgtggaccacatcgacatctacgccgacgtagaggaggaattcaaccag
gaagcggactacccagtccacgagcagatcgacctgtatgatgacgtcatatccccatct
gctaataatggtgacgctccagaggaccgggactacctggacacgctacctgctccgggc
gggacagagggaggcaagagtgccccgcccaatgtagtctacacctacacgggcaagagg
attgccctgtacattgggaacctcacatggtggacaacagatgaggacctgaccgaagcc
atcaggacgataggcatcacagacgtgctggagataaagttctttgagaaccgagccaac
ggccagtctaaagggtttgcgctggtgtgtgtgggctcagaagtgtcctccaggaagttg
atggaattgctgtcaaagagggagctgcatggtcagaatccaatcgtcacgccatgcaac
aaacagtcgctcagccagtttgagatgcagtcacgcaaaagtacccaatcaggccagatg
tcaggtgagggtaaggctggtccccccggcattggcccacgtggctttcctatgggcagt
agaggccgaggcagattccctggtcctcctggccccggaggcgagcgcttccctggcccc
attggccctggaggtccaccaccacacttccccggctctgggatgagaccagatctgatt
aggcagcaagatggccttctgatggatatgaatttcaatcccttctcgccggggggcagg
gacgggagctggcgacccagaggtggaatgcagggccctcctcgcccccctccaggaccc
cctggtccgccaggccccccaccccccggccagggcctcccacctcccctctcaggtcct
cccaaccgcggtgatcgcccccctccccctgtcctcttccctggtcagtttggccagcca
cctatgggacccatgccgcccggcccgcctcctccaggttacggccctcctcctggcccc
ccaccacctcagcaggggcccccaccaccagggcccttcccacctcggcctccgggcccc
attgggccacccatggctctggcaccccctcctcacatgcctggtcccccacctggtgga
cccccacctgccccgcatgtcaacccagccttcttccccccacctggaaacaacaacatg
ccccctaatgataacagaggacctccgggaccaaacgacccatacggacgcccgccaccc
tacgagaggggagagtatggccccggtggacgggaaatggaggcgtcacggacccctctg
agcgaggcggagtttgaggagatcatgaaccggaacagagccatctcctccagtgccata
tccagagcagtctctgacgccagtgctgctgactatggcagcgctatcgagaccttggtg
acggcaatcagtctgataaagcagtccaaggtttctgctgatgaccgctgtaaggtcctc
atcagctccctgcaggactgtcttcatggcattgagtccaaaagctacggatctgccaga
cgtgagcggtccagagaacgggaccacagccgctccagggaaaagagcagacgccacaag
tcccgcagtcgtgaccggcacgaggactattaccgcgagcgcagtcgggaacgtgaccgc
caccgcgagagggatcgcgacagagaccgggagagagagcgggaaagggagtaccgtcat
cgctaa
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