Zobellia galactanivorans: ZOBELLIA_1082
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Entry
ZOBELLIA_1082 CDS
T01586
Symbol
topA2
Name
(GenBank) DNA topoisomerase 1B
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
zga
Zobellia galactanivorans
Brite
KEGG Orthology (KO) [BR:
zga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zga03032
]
ZOBELLIA_1082 (topA2)
03400 DNA repair and recombination proteins [BR:
zga03400
]
ZOBELLIA_1082 (topA2)
Enzymes [BR:
zga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ZOBELLIA_1082 (topA2)
DNA replication proteins [BR:
zga03032
]
Prokaryotic type
DNA Topoisomerases
ZOBELLIA_1082 (topA2)
DNA repair and recombination proteins [BR:
zga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ZOBELLIA_1082 (topA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF4246_N
CaMKII_AD
Motif
Other DBs
NCBI-ProteinID:
CAZ95139
UniProt:
G0LA86
LinkDB
All DBs
Position
1296613..1297683
Genome browser
AA seq
356 aa
AA seq
DB search
MTKAKLLSQLLKAPELAIENLDLVYVDHGKLSISRLRKGEGFTYIYNQKPLTDPKELKRI
TSLVLPPAWEDVQITHLSNGHLQAVGKDLKKRKQYRYHPTWVKIRKQTKFYKMALFGKKL
PVIRAQVEKDLSLKEWSKAKVVALIIKLMDETHIRIGNEQYAKRNKSYGLSTMRKKHIEV
FKNNIKFEFVGKKGKKHSVTVRNKKLMRLISRCEDIPGWELFQYYDEAGKKQSVDSAMVN
EYLHEISGEFFTAKDFRTWAASVVFFDTLLDLGLAETQKETQKNLLMGFDAAAAALGNTR
NVCRKYYVHPVLPTSYEDGSIKKYFDKTHKSDSQSEHFSTSEMVILELFEQYTPQF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagcgaaattattaagccaactattaaaagctcccgaattggccatcgaaaac
ctcgacttggtctatgtagaccacggtaagctgtcgatatcccggcttcgaaagggagag
gggtttacctatatatacaatcaaaagccccttaccgaccccaaggaactgaagcgcatt
acaagccttgttttaccacctgcatgggaagacgtacagattacccacctatccaatggc
caccttcaagccgtaggcaaagaccttaaaaaaaggaagcaataccgctaccacccgact
tgggtaaaaatcagaaagcagaccaagttttataaaatggccctattcggaaaaaagttg
ccggtcatcagggcccaggtagaaaaagacctctcgttaaaagaatggtcaaaggccaaa
gtggtggccctgatcataaagttgatggatgaaacccacatacgcatcggcaacgagcaa
tatgccaaacgcaacaaatcgtacggactttctaccatgcgcaaaaaacatattgaagtt
tttaaaaacaatatcaagttcgagttcgtgggaaaaaaaggcaagaagcactcggttacg
gtacgcaacaaaaaattaatgcgccttatcagtcgttgtgaagacataccgggttgggaa
ctttttcagtattacgatgaagcgggcaaaaaacaatcagtagacagtgctatggtcaat
gaatacctgcacgagatcagcggtgagttttttaccgccaaggattttaggacttgggcc
gcttcggtggtttttttcgatacccttttagacctgggcctagcggaaacccaaaaggaa
acccaaaaaaacctgctcatgggttttgatgccgccgctgcggccctaggtaataccaga
aatgtatgtcgcaaatattacgtgcatccggttttgcctacttcctatgaagacgggtcc
ataaaaaaatacttcgacaagacccataaaagcgattctcaatcggaacatttttccact
tccgaaatggtcatactcgaactctttgaacagtacactccccaattttaa
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