Zobellia galactanivorans: ZOBELLIA_1153
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Entry
ZOBELLIA_1153 CDS
T01586
Symbol
topA1
Name
(GenBank) DNA topoisomerase IA
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
zga
Zobellia galactanivorans
Brite
KEGG Orthology (KO) [BR:
zga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zga03032
]
ZOBELLIA_1153 (topA1)
03400 DNA repair and recombination proteins [BR:
zga03400
]
ZOBELLIA_1153 (topA1)
Enzymes [BR:
zga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ZOBELLIA_1153 (topA1)
DNA replication proteins [BR:
zga03032
]
Prokaryotic type
DNA Topoisomerases
ZOBELLIA_1153 (topA1)
DNA repair and recombination proteins [BR:
zga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ZOBELLIA_1153 (topA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
CAZ95210
UniProt:
G0L357
LinkDB
All DBs
Position
complement(1377169..1379661)
Genome browser
AA seq
830 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDYKVESSFGHIADLPSKELGVDVENDFKPKYIVDKDK
KALVKKLGDLAKKAETIWLASDEDREGEAISWHLAETLGLDKNKTKRIVFNSITKSAIQK
AIENPREINYNLVNAQQARRVLDRLVGYELSPVLWKKIKPGLSAGRVQSVAVRLIVERER
DIEAFTAEASFRVSAEFKTLEGSVFTAKLNKTFPTKEEAQAFLNENIGADFSVGNLDKKP
AKKSPSAPFTTSTLQQEASRKLYFSVGRTMQVAQRLYEAGLITYMRTDSVNLSGEAIAAA
KDAIIDNYGEKYSTVRNFKGKSKGAQEAHEAIRPTDITNQSPSLERDQSKLYELIWKRTI
ASQMSDAQLERTNVKIKASTHSELFTANGEVIKFDGFLKVYMEGLDEEDVAEEQEGMLPA
MKVGEALKNNYITATERFSRPPYRFTEASLVKKLEELGIGRPSTYAPTISTIQNRGYVEK
GTVEGTERNYVQLLLEAGAVKEKKLSEMVGSDKGKLVPTDIGMIVNDFLVSHFATILDYN
FTAKVEEDFDEIAEGEEDWQKVMRDFYKDFHPNVLDVQENADRASGERILGEDPKTGRQV
SVRLGRFGPMVQMGTVDDEEKPKFASLLPEQSLTTITYDEAMELFKLPRKLGVYEGEEIE
ANVGRFGPYVRFGKKFVSLEAGESAFDVNFDRAVELIKQKQKADAPIYTYEGKEVTKGTG
RFGPFIKWDGMFINVNKKYDFDNLSNDDLIELIEAKKQKEIDKVVQNWPEEGIRIEKARW
GRHNIIKGKVKVELAKTVDAAKMSLDEAKKMIEQKTPKKKAKAKPKAKKK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaatttagtaatagtagagtcacctgcaaaggcaaaaacgatagaaaagttt
ttaggaaaggattataaggtagagtccagtttcgggcatattgccgatttaccttccaaa
gaactaggggtagatgtcgagaatgattttaagcccaaatatattgtcgataaagacaag
aaagccttggtgaaaaaacttggggatttggccaagaaagcggaaacaatatggctcgca
agtgatgaagaccgcgaaggagaagccatttcctggcatttagcggaaaccttgggccta
gataaaaataagaccaagcgtattgtctttaactccattaccaagtctgccatacagaaa
gcgatagaaaatccgcgagagatcaattataacttggtcaatgcccaacaggccagaagg
gtgttagaccgcttggtggggtacgagctttctcccgtgttatggaaaaagatcaaaccg
ggactttcggccggtagggtacaatccgttgccgttcgtcttatagtggaacgggaaagg
gatattgaggcctttacagcagaagcgtcctttagggtgtcggcagagttcaagaccctt
gagggtagtgtgtttacggcaaaattgaacaaaaccttccctacaaaagaagaggcacag
gcctttttgaacgaaaacataggggctgatttttcagttgggaacctagataaaaaaccc
gcaaaaaagtcgccatcggcaccttttaccacctctaccttacagcaggaagcttcaaga
aagctttatttttcggttggtagaacaatgcaagtggcacagcgtctatacgaggcgggg
cttatcacctatatgagaaccgatagtgtgaacctttcgggggaagccatagcggcggcc
aaagatgccattatagacaactacggtgaaaagtacagtaccgtccgtaactttaaaggg
aagtcgaaaggggcacaagaggctcacgaggccattcgacccacggatataaccaatcaa
tcgccatcacttgagcgcgaccagtctaaattatacgaattgatttggaagcgtaccata
gcctcgcagatgagcgatgcccaattggaacgtacgaacgtaaaaattaaggcaagtacc
cattcagagctatttacggccaatggggaggtcattaagttcgatggtttccttaaggtg
tatatggaaggccttgatgaagaagatgtggccgaagagcaagaaggaatgcttcctgcc
atgaaagtgggcgaagctttaaaaaacaattatattaccgcgaccgaacgtttttcaagg
ccgccataccgctttaccgaagcatctttggtgaaaaagctcgaagaactaggtattggt
cgaccgtctacatatgcgccgaccatttccactattcagaataggggctatgtagaaaaa
ggaacggttgagggtacggaacgaaattatgtgcagttgcttttggaagctggtgccgta
aaagagaaaaaactctctgaaatggtcggttccgacaaaggtaagctggtgcctaccgat
atcggtatgatcgtaaacgactttttggtaagtcattttgccacgatccttgattataat
tttaccgccaaggtagaggaagattttgatgagatcgccgagggagaagaagattggcag
aaggtgatgagggatttttacaaagatttccacccgaatgtactcgatgtgcaagaaaat
gccgatcgagccagtggcgaacgtattttaggcgaggaccctaaaacgggccgtcaagtg
tccgttcgtttggggcgttttgggcctatggttcaaatgggtaccgttgatgatgaggaa
aaacccaagtttgcaagccttttgcccgaacagtccttgaccactattacttacgatgag
gcaatggagttgttcaagcttccgcgaaagctaggggtttatgaaggagaggaaatcgag
gcgaatgtaggtaggtttggaccttatgtgcgttttgggaagaaattcgtgtccctggaa
gcgggagagagcgccttcgacgtaaacttcgaccgtgcggtcgagttgataaagcaaaag
caaaaagccgatgcccccatctatacctatgaaggtaaggaggtaacgaaaggaaccgga
aggttcgggccttttatcaaatgggacggtatgtttattaacgttaataagaaatatgat
ttcgataacctttcgaatgatgaccttattgagttgattgaagctaaaaaacaaaaagaa
atcgataaggtagtgcaaaactggcctgaagaaggtatacgtatcgaaaaggcacgttgg
ggcaggcacaacattataaaaggtaaggtaaaggtagagctggccaagaccgttgatgcg
gccaagatgtctttggacgaggccaaaaaaatgatcgaacagaaaacgccgaagaaaaaa
gcaaaggctaagcccaaggccaaaaagaaatag
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