Zobellia galactanivorans: ZOBELLIA_1323
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Entry
ZOBELLIA_1323 CDS
T01586
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
zga
Zobellia galactanivorans
Brite
KEGG Orthology (KO) [BR:
zga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zga03016
]
ZOBELLIA_1323 (truB)
Enzymes [BR:
zga01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ZOBELLIA_1323 (truB)
Transfer RNA biogenesis [BR:
zga03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ZOBELLIA_1323 (truB)
Prokaryotic type
ZOBELLIA_1323 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CAZ95379
UniProt:
G0L3P3
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All DBs
Position
1576087..1576800
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AA seq
237 aa
AA seq
DB search
MDSRSKEDFLDGQILLIDKPLGWSSFQAVNKLKWAIRSKFKLKKFKIGHAGTLDPLATGL
LIICCGKFTKKIPELQGQVKEYTGTITLGATTPSYDLETEVDQTYPTEHITKALLNETLL
QFIGDIEQRPPVFSALKKDGKRLYEYAREGKDVEIKTRIVNVSTFEITQMKLPELKFRIV
CSKGTYIRSLAHDLGQALGSGGHLSELRRTKIGEYNVNTATDPNVFAENLLGKTTKS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggattcgcgtagcaaagaagactttcttgacggacaaatattgcttatagacaagccg
ctaggatggtcgtcttttcaagccgtaaacaaattaaaatgggccattcgctcaaaattc
aaactcaagaagtttaaaatcggccatgcgggaaccttagatcctttagctacaggacta
ctcatcatttgctgcggaaagttcaccaagaaaataccggagcttcaaggccaggtaaag
gaatatacgggcaccataaccctcggcgccaccaccccttcgtacgatttggaaaccgaa
gtcgaccaaacctaccctaccgaacatatcaccaaagccttgctcaacgagaccctctta
caatttataggcgatatcgagcaacgcccccctgtattttcggccctaaaaaaagacggc
aagcgcctttacgaatatgcccgcgaaggaaaggacgtggaaataaaaacaaggatcgta
aacgtttcgacttttgaaatcacccaaatgaagctgcccgagctaaaattcaggattgtt
tgcagtaaaggcacctacattagatctttggcacacgatttggggcaagcattagggagc
ggaggccatttatctgaactcaggagaaccaaaataggagaatacaacgtaaatacagcc
acagatcctaatgtttttgcggaaaatctactgggaaaaacgacaaaatcgtaa
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