Zobellia galactanivorans: ZOBELLIA_1534
Help
Entry
ZOBELLIA_1534 CDS
T01586
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
zga
Zobellia galactanivorans
Pathway
zga03410
Base excision repair
zga03430
Mismatch repair
zga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ZOBELLIA_1534 (recJ)
03430 Mismatch repair
ZOBELLIA_1534 (recJ)
03440 Homologous recombination
ZOBELLIA_1534 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zga03400
]
ZOBELLIA_1534 (recJ)
DNA repair and recombination proteins [BR:
zga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ZOBELLIA_1534 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ZOBELLIA_1534 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ZOBELLIA_1534 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF3526
Motif
Other DBs
NCBI-ProteinID:
CAZ95590
UniProt:
G0LAV4
LinkDB
All DBs
Position
1818775..1820463
Genome browser
AA seq
562 aa
AA seq
DB search
MRWTIKPKPQQDEIDQLAQALHVDGLVAQLLLQRGISSYEEAKKFFRPQLSHLHDPFLMK
DMDLAVARIEKAIAHNENILVYGDYDVDGTTSVALLSSYLLSYYPNVATYIPDRYAEGYG
VSFKGIDFADDNGFSLIVALDCGVKAIDKVTYAKEKGIDFIICDHHRPGDHIPDAVAVLD
PKRGDCTYPYDELCGCGVGFKLVQALGSRQGHTIHDLIPYLDLVATAIGADIVPITGENR
VLAYYGLQVINTNPRAGFKAIIHQIKKTVLTITDVVFVIAPRINAAGRMKHGQHAVNLLT
ETDLAQAETFAAQIEKFNEDRRGLDKEITQEALEQIQENKEEERFTSVVYKASWHKGVIG
IVASRLTETYYRPTLVFTKSGEKLAASARSVKGFDVYNALQGCADCIEQFGGHKYAAGLT
LQESQYEEFKARFEKVVAETIDPNLLIPEISVDAQIDFRDISPKLMRIIKQFAPFGPGNM
TPVFMAENLKDTGYAKGVGEDGAHLKLAATQNGIGPIGGIGFNMGDKLSIVANRQPFSAV
FSLDENEWQGNVSLQMKLKDIQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggaccattaaaccgaaaccccaacaagatgaaatcgaccaattggcacaagcg
cttcatgttgatggattagtggcccaattgttattacaaaggggaatctcttcttacgaa
gaagccaaaaagttctttcgcccacaattgagccatttgcacgaccctttcttaatgaag
gacatggatttggccgtagcccgtatagaaaaagccattgcccataacgagaacatcttg
gtctatggcgattacgacgtagacggaactacctccgtggccctactttcgtcgtaccta
ctgagttactatcctaacgtggccacctatattcccgacagatatgccgaaggatatgga
gtttcatttaagggaatcgacttcgccgacgacaacggcttttcattgatcgttgccctt
gactgtggggtaaaggccattgacaaagtaacctacgccaaagaaaaaggaatagacttt
attatttgcgaccaccatagaccaggcgaccatattcccgatgcggtggctgttctcgat
cccaaacgcggtgattgcacttacccctacgacgaactttgtggctgtggggtaggcttc
aagctcgttcaggccttgggctcaaggcaaggacataccattcacgacctgattccctac
cttgacctagtggctaccgccattggcgccgacattgtgcctattacgggagaaaacagg
gttttggcctattacggactacaggtaatcaacaccaatccgagagccggttttaaggcg
atcatccaccaaatcaagaaaacggtgcttaccattaccgatgtagttttcgtgatcgct
ccgcggataaatgcggcgggccgtatgaaacacgggcaacatgccgtaaacctgttgacc
gaaaccgatctggcccaagcggagacttttgccgcccaaatcgaaaaattcaacgaagac
cggcgcggactcgacaaagagattacccaagaagccctagaacagatccaagaaaacaaa
gaggaagagcgctttacctcggtagtctataaagcatcttggcataagggtgtaatcggc
attgtagcctcccgccttaccgaaacctattatcgcccaaccctagtctttaccaagagt
ggcgagaaactggccgcttcggcccgctcggtaaagggtttcgacgtttataacgcccta
cagggctgtgccgactgtattgagcagttcgggggacacaaatatgctgcgggcctcacc
ctgcaggaatcgcaatacgaagaattcaaggcccggtttgaaaaggtagtcgctgaaacc
atagacccgaacctcttgattccggaaatttccgtagacgcccaaatcgattttagggat
atttccccaaagctcatgcgcatcatcaaacaatttgccccctttggccccggcaacatg
accccggtattcatggcagaaaacctcaaggatacaggctacgccaaaggcgtcggcgaa
gatggggcccatttaaaattggccgccacccaaaacggaatcgggcccatagggggcatc
ggttttaacatgggcgacaagctttccatagtggcgaacaggcagcctttcagtgccgtt
ttttccttggatgaaaatgaatggcaaggaaacgtaagcttgcaaatgaaactaaaagac
atacaatga
DBGET
integrated database retrieval system
