Zobellia galactanivorans: ZOBELLIA_2019
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Entry
ZOBELLIA_2019 CDS
T01586
Symbol
rimK2
Name
(GenBank) Ribosomal protein S6 modification protein
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
zga
Zobellia galactanivorans
Brite
KEGG Orthology (KO) [BR:
zga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zga03009
]
ZOBELLIA_2019 (rimK2)
Ribosome biogenesis [BR:
zga03009
]
Prokaryotic type
ribosomal protein modification factors
ZOBELLIA_2019 (rimK2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
Zn_protease
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
Dala_Dala_lig_C
GARS_A
R2K_3
TTL
ATP-grasp
D123
Motif
Other DBs
NCBI-ProteinID:
CAZ96122
UniProt:
G0L5B7
LinkDB
All DBs
Position
2356004..2357374
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AA seq
456 aa
AA seq
DB search
MTDLKIIGSEEWCVFENLGIPAIKARVDSGAKTSSIQATNIKIIMKGTQEWVKFEVSPLQ
ENRSISIPCQARLVDRRMVKSSSGISEERLVVRTAVTLGDETFEIELTLANRDTMEFRML
LGREALNERYIVNPALNYQIQDFDEAVINQKYAPYFKEKTGLKIALLASNPNLYSNKRIM
EAAEARGHEIVFLNVELAYMKLDAHSPEIRYRGGNILNAFDAVIPRIKPSVTFYGCALIR
QFDNLGVYCQNTAEAITQSRDKLFASQLFSKNDIHIPITGFAKSPMDTKDLIKMVNGAPL
IIKLLESTQGKGVVLAETNKAAESVINAFKSVNTNILVQEFIKEANGQDIRCFVVNGKVV
ASMQRQAEKGEFRANIHQGGKASIIRITSEERKLAQKAAKVLNLAVAGVDIIRSNKGPLL
LEVNSSPGLEGIENATGKDIANEMIVAIEKKLRFSI
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttgactgacttaaagattataggaagcgaagaatggtgcgtgtttgaaaatttgggtatc
ccggccataaaggcaagggtagattcaggggccaaaacatcgtccatacaagcgaccaac
ataaagattattatgaagggcacccaagaatgggtaaagtttgaagtaagcccgcttcaa
gaaaaccgaagtatttccataccctgtcaggcgcggttggtagaccgtagaatggtaaaa
agttcttcgggaatctcagaagagcgcttggtggtacgtactgcggttaccttgggagac
gagactttcgagatagagcttaccttggccaaccgtgataccatggagtttcgtatgctc
ttggggcgcgaggcgctgaacgaacgttacattgttaaccctgcactcaattatcagata
caggattttgacgaagcggtcattaaccaaaaatacgctccctattttaaggagaaaacg
gggttaaagattgccctcttggccagcaaccctaacctatatagtaataagcgtatcatg
gaagccgctgaggcccgtggtcatgaaattgtttttctgaacgtagaattggcttatatg
aagcttgatgcccactcgcctgaaatccggtatagagggggcaatattctgaatgccttc
gatgccgttataccgagaatcaaaccttcggttaccttttatggttgtgcattgatccga
caattcgataatcttggggtctattgccaaaatacggccgaggccattacgcagtcaagg
gacaagctttttgcatcgcaattgttttctaagaacgatatacatattcctataaccggt
tttgccaaatccccaatggataccaaagacctgatcaaaatggtcaatggggcaccttta
attatcaagttgctggaaagtactcaaggaaaaggggtggtgctcgccgagaccaataag
gctgcagagagcgtgatcaatgcatttaaaagtgtaaataccaatattttggtgcaagag
tttatcaaggaagccaacgggcaagatattcgctgtttcgttgtcaacggaaaagtagtg
gcctctatgcaaagacaggctgaaaaaggggagttcagggccaatatccaccaaggcggc
aaggcttccattattaggatcacttccgaagaacgcaaactggcacaaaaggcggcaaaa
gttttgaacctggccgttgccggggtcgatatcattcgctcgaacaaaggccccttgctc
ttagaggtaaattcgtcccccggtcttgaaggcatcgaaaatgcaacgggaaaagacatt
gccaatgaaatgatcgtggccattgaaaagaagttaaggtttagtatctaa
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