Zobellia galactanivorans: ZOBELLIA_2178
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Entry
ZOBELLIA_2178 CDS
T01586
Symbol
dnaE1
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
zga
Zobellia galactanivorans
Pathway
zga03030
DNA replication
zga03430
Mismatch repair
zga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ZOBELLIA_2178 (dnaE1)
03430 Mismatch repair
ZOBELLIA_2178 (dnaE1)
03440 Homologous recombination
ZOBELLIA_2178 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zga03032
]
ZOBELLIA_2178 (dnaE1)
03400 DNA repair and recombination proteins [BR:
zga03400
]
ZOBELLIA_2178 (dnaE1)
Enzymes [BR:
zga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ZOBELLIA_2178 (dnaE1)
DNA replication proteins [BR:
zga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ZOBELLIA_2178 (dnaE1)
DNA repair and recombination proteins [BR:
zga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ZOBELLIA_2178 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
CAZ96335
UniProt:
G0LBP2
LinkDB
All DBs
Position
2542812..2547248
Genome browser
AA seq
1478 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDTDNWPRCIQIAWQLHDEMGRCIEHQDYLVRPDGFNIPY
DAEQIHGISTELAEQQGVALSEVLEKFNIAMSKTKFIVGQNVGFDVNIMGAEFHRMGVEN
PLQELPVLDTCTEHTAQLCQIPGGRGGKFKLPTLTELHQFLFGEPFGEAHNATADVEATT
RCFLELIRKEQYTAEQLDVQPDYFKNFSEANPQEIQLIGLKHINLKKASKKIADALWEKD
TGGVSQEEIEENLATLESASFAHLHNHTQFSILQSTISVPDLIAATAKAKMPAVAMTDHA
NMMGAFHFVNGVLNHNKGVVARNEENLKRYEATRNGTLEEGQEPLNELPEPELEITPIIG
CEFQVCEDHTNKSQKDNGYQIVMLAKSKKGYLNLAKMSSIAFVDGKYYVPRIDKKIVEQY
KEDVMVLTGNLYGEVPSKVLNVGEKQAEEALIWWKETFGDDLYIEIMRHGQEDEDRVNQV
LIQFAKKHNVKLVATNNTYYVNKENAYAHDILLCVKDGEKQSTPIGRGRGYRYGLPNQEY
YFKSSEEMKELFKDIPEAIINIQEIVDKVETFTLARDVLLPAFDIPEEFQFEEDKLDGGK
RGENKYLRHITYEGAKKRYGEITPEIDERLDFELKVIEKTGYPGYFLIVEDFIRAARKMD
VSVGPGRGSAAGSAVAYCLWITNLDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRSRVM
DYVIEKYGANQVAQIITYGTMAAKSSIRDTARVLDLPLGDADRMAKLIPNMSKLKKIIGV
DEKVLRSKFNSEELEKINELLNISEGDGLESETLNQAYVLEGSVRNTGIHACGVIITPDD
ITKFVPVALAKDSDMYCTQFDNSVVESAGLLKMDFLGLKTLTLIKDTVKIVKAKHGIELD
PENFPLDDEKTYELFQRGETIGVFQYESPGMQKHMRALKPTVFADLIAMNALYRPGPMEY
IPSFIARKHGTEEIVYDLDACEEYLAETYGITVYQEQVMLLSQKLADFTKGEADVLRKAM
GKKQKHVLDKMKPKFIEQASAKGHPVDKLEKIWKDWEAFAAYAFNKSHSTCYAWIAYQTA
YCKAHYPAEYMAAVLSNNMNDIKQVTFFMEECKRMGLDVLGPDVNESYYKFAVNDAGAVR
FGMGAIKGVGRGAVETIVESRKEGGPFKSVFDFAKRIDLRAANKKAFENLAVAGGFDSFG
DTHRAQYFHDEGDGITFLEKTIKYGAKFQESENSSQVSLFGDASEVQIPEPQVPPCEEWG
TMEKLRREKEVVGIYISGHPLDDFKTEIDAFCNASLANLSDLESVVNRELAFAGVITDVQ
HRVSKNGKGWASFTVEDYSESFEFRIFGEEYLKFRHFLMINSFVYIKVFVREGWMNRDTG
KKGDPRIQFNSFMLLQEVMETYAKKLTIKLNIDDLKEEDIHQLKDTLLSHTGNHPLNFVV
YEMEEEIKVSLTSRKQKVQISSELLATLRENEVHYKLN
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atgtacctcatttttgatacggaaaccaccggacttcccaaacgttgggatgcacccata
accgataccgacaactggccgcgctgtatacagatcgcttggcagttgcatgatgaaatg
gggcggtgtatagagcatcaagattacctagtgcgtcccgatggctttaatatcccctat
gatgccgagcagatccacggaatttccacggagctcgccgaacaacagggggttgccttg
tcggaggtcttggagaagttcaacatcgccatgtcgaagaccaagtttatcgtggggcag
aacgttggctttgatgtaaatattatgggggcggaattccaccgtatgggcgttgagaac
cccttgcaggaattgccggttttagatacctgtaccgagcatacggcacaattgtgccag
ataccgggtggacgcgggggcaagtttaagcttcctaccttgacggagctgcaccagttt
ttgttcggggaacctttcggggaagcgcacaatgccacggccgatgttgaggccactacg
cgttgttttctcgagcttatccgtaaagaacaatataccgctgaacagttagatgttcag
cccgattatttcaagaatttttcagaggcgaatccgcaagagatccagcttatcggattg
aagcatatcaaccttaaaaaggcttccaaaaaaatagcggatgccctttgggaaaaagat
accggtggggtgtcgcaagaggaaatagaggagaacctggctactttggagtcggccagt
ttcgcccatttgcacaaccatacccaattttccatacttcagtccaccataagcgtaccc
gatttgatcgcggctacggccaaggctaaaatgcccgccgttgccatgaccgaccacgcg
aatatgatgggcgcctttcactttgtcaatggggtgctcaaccacaacaaaggggtggtg
gcccgtaacgaggagaacctgaagcgttatgaggcaacacggaacggaacccttgaagaa
ggccaggagccgttgaacgaattgcccgaacctgaattggagataaccccgattatcggt
tgtgagtttcaggtctgtgaagaccataccaacaagtcgcaaaaagacaacgggtatcaa
attgtgatgctcgccaagagcaaaaagggctacttgaacttggcaaaaatgtcttccatt
gcctttgttgacggaaaatattacgtaccccgaatcgataaaaaaatcgttgagcagtac
aaggaagatgtaatggtgctgacgggtaacctttatggtgaggtgcccagtaaggtattg
aacgtaggggagaagcaggcggaagaggccttgatatggtggaaagagacttttggggat
gacctctatatagagatcatgcgccatggtcaagaagatgaagaccgtgtaaaccaagtg
ttgatacagtttgccaaaaagcacaatgtaaaactggtcgccaccaacaatacctattat
gtaaacaaggaaaacgcatatgcgcacgatattttgctttgcgttaaagacggtgagaaa
cagtctacacctataggtcggggccgtggctatcgttacggacttcccaatcaagagtat
tacttcaagtcttccgaagaaatgaaggagctctttaaggatattcccgaagccattatc
aatattcaggaaatcgttgataaggtagagacctttaccttggcgcgtgatgtactcttg
ccggccttcgatatacctgaggaattccagtttgaagaagataagctggacggggggaaa
cgcggggaaaacaagtacctgcgccatattacctacgaaggggccaaaaagcgatatggg
gaaataacgccagagatagacgagcgactagactttgagttgaaggtaatcgagaaaacc
gggtatccggggtatttcttgattgtggaagattttattcgggcggcgagaaagatggac
gtttcggtgggtccgggccgtggttccgcggcgggttcggccgtggcctattgcttatgg
attaccaatttggacccgatcaagtacgacctgctttttgagcgcttcttgaaccccgac
cgtgtgagtatgcccgatatcgatatcgactttgatgacgaggggcgtagccgtgtgatg
gactatgtaatcgaaaaatacggggccaaccaggtagcacagatcatcacctatggtacc
atggccgccaaatcgtcgattcgcgatacggcaagggtattggacctgcccttgggcgat
gccgaccgtatggcgaagctgatccccaacatgtctaaactgaaaaagattatcggggta
gatgaaaaggtgttgaggagcaagttcaatagcgaagagcttgaaaaaataaacgaactc
ttgaatatttccgagggtgacggacttgagtcggagaccttgaaccaggcctacgtttta
gaggggtcggtgcgtaacaccggtatccatgcctgtggggtgatcattacccccgatgat
attaccaagttcgttcctgtggccctggccaaggattccgatatgtactgtacccagttc
gataactcggtggtggaaagtgcgggactgttgaagatggatttcttgggactcaagacc
ttgaccttgatcaaggataccgtaaagatcgtaaaggcgaagcacggtattgagttggat
cccgaaaattttccgcttgacgacgaaaaaacatacgagcttttccaaaggggcgagacc
attggggtgttccaatacgaatcgcccggtatgcaaaagcacatgcgtgcgctgaaacct
acggtttttgcggatttgatcgctatgaacgccctctatcgtcccgggcctatggaatac
attcctagctttatcgcccgtaaacatggtaccgaggaaattgtatacgacctcgatgcc
tgtgaagagtacctcgccgaaacctatggtattacggtataccaagagcaggtgatgctc
ctctcgcaaaaactggccgactttaccaagggtgaggccgacgtcttgcgtaaggccatg
ggtaaaaagcaaaagcacgtacttgataaaatgaagcccaagttcattgaacaggcttct
gcaaagggacatccggtagataaactggaaaaaatatggaaagactgggaggcctttgcc
gcctatgcctttaacaaatcgcattctacctgttatgcgtggatcgcataccaaacggcg
tattgtaaggcccattatccggccgaatatatggctgccgtgctgtcgaacaacatgaac
gacatcaagcaggtgaccttctttatggaggaatgtaagcgtatgggactcgacgttttg
ggtcccgatgtcaacgaatcgtattataagtttgcggtgaacgatgccggtgccgtccgt
tttggaatgggggccattaaaggtgtgggccgaggtgcggtagagaccattgttgaaagt
agaaaagaaggaggaccgttcaagtcggtcttcgattttgccaaacgtatagatttgcgt
gccgccaataaaaaagcctttgagaaccttgcggtggccgggggcttcgattccttcggg
gatacgcacagggcccaatattttcacgatgaaggggacggcattacctttttggaaaag
accataaagtacggagccaagtttcaggaaagcgaaaattctagccaggtaagccttttt
ggcgatgccagtgaggtgcagataccggaaccgcaagtaccgccatgcgaagagtggggt
actatggagaaactacggcgcgagaaagaagtggtggggatctatatctcaggtcacccc
ttagacgattttaaaaccgaaatcgatgcgttctgtaatgcaagcttggcgaacctgagc
gatcttgaaagtgtggtaaaccgagagttggcctttgcgggagttattaccgacgtgcaa
catagggtttcaaagaacggaaaaggctgggcgtcgtttacggtagaagattattcggag
tccttcgaattcaggatttttggggaagagtacctaaagttccgccatttccttatgatc
aactccttcgtttatatcaaggtctttgttcgtgaaggatggatgaaccgtgataccggt
aaaaaaggagatccccgtatacagttcaatagctttatgctgcttcaggaagtaatggaa
acctatgccaaaaaacttacgatcaagctcaatatcgatgacctaaaggaagaagatatc
catcaattgaaggacaccctattgtcgcatacgggcaatcatccgttgaattttgtcgtg
tatgaaatggaggaagaaatcaaggtgagtctaacaagccgaaagcaaaaagtgcagatt
agcagtgaactgttggcaacactaagggaaaatgaggtgcattataagctaaattag
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integrated database retrieval system
