Zobellia galactanivorans: ZOBELLIA_2604
Help
Entry
ZOBELLIA_2604 CDS
T01586
Name
(GenBank) Nuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
zga
Zobellia galactanivorans
Pathway
zga03030
DNA replication
zga03430
Mismatch repair
zga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ZOBELLIA_2604
03430 Mismatch repair
ZOBELLIA_2604
03440 Homologous recombination
ZOBELLIA_2604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zga03032
]
ZOBELLIA_2604
03400 DNA repair and recombination proteins [BR:
zga03400
]
ZOBELLIA_2604
Enzymes [BR:
zga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ZOBELLIA_2604
DNA replication proteins [BR:
zga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ZOBELLIA_2604
DNA repair and recombination proteins [BR:
zga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ZOBELLIA_2604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DUF7508
PipA
PHM7_cyt
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CAZ96754
UniProt:
G0L672
LinkDB
All DBs
Position
complement(3059077..3060462)
Genome browser
AA seq
461 aa
AA seq
DB search
MYSIVDIETTGNGIKGNKITEISIFKFDGYEIVEEFTSLVNPQCEIPYFITRLTGIDGDM
VRDAPTLDEIVDDILKITENTIFVAHSVNFDYNVIKNELKLLGRDFIRKKLCTVRLSRKL
LPGYHSYSLGKLCSSLGIPLTDRHRARGDAHATTLLFKKLLRADGAEEVFKSHLNARSQE
TTLPSSLPREAFEKLPAAPGIYYFKDGKGKIIYVGKAINIKKRVLSHFYDKSTKEIQLCQ
ATADIDFELSGSELVALLMESNAIKHHYPEFNRAQKRKIQPYGIFSYEDRNGIMHLAFNK
LKMAPNSVLTLYGPTDCRLFIEEICKRFRLCPKYCHLQENVKSCSHYRIESCDGICREEE
ATDHYNEKVHRALHHIRAQKEDFVIREKGRNANEQAFVYVKNSTYMGYGFVDRQEHISAE
HELETFLVQQNNTLETESIIKSYLSKNPDKIVILNSEHHND
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
ttgtacagcatcgtagacatagaaaccaccggcaatggcataaagggtaataagattacc
gaaatatccatttttaaatttgacggttacgaaatcgtcgaggagtttacctccttggta
aacccgcaatgtgaaataccctatttcatcacgcgactgacgggaatcgatggcgatatg
gtccgtgatgcacctacactggacgaaattgtggatgacattctgaaaattacggaaaac
accatttttgtagcccatagcgtaaacttcgactacaatgtaatcaagaacgaattaaaa
ctcttgggaagggactttattaggaaaaagctctgtaccgtccgtttatcgcgtaagctc
ttgcctggataccattcgtacagtctaggaaagctatgttcttcattgggcattcccttg
accgacaggcatcgtgcccgcggcgatgcccatgccacaaccctactttttaaaaaatta
ttgcgcgcagatggggccgaagaagtgttcaagagccacctcaacgcccgctcacaggaa
accaccctaccctcttccctgcctagggaagcctttgaaaaactgcctgcagcgcccggc
atttattatttcaaggacgggaaggggaaaatcatctatgtaggaaaggccattaacatc
aagaagagggtgttaagccatttttacgacaagtctaccaaggaaatacagctctgccag
gccacggccgatatcgattttgaactctcgggaagcgagctcgtggccctgttgatggaa
tcgaatgccatcaagcaccactaccccgaattcaaccgcgcccaaaaaagaaagattcaa
ccctacggcatattcagttatgaagaccgcaacggcattatgcacctggccttcaacaaa
ctgaaaatggccccaaactcggtattgaccctctacggacctaccgattgccgattgttc
atcgaagaaatctgtaagcgctttaggctctgccccaagtattgccatctgcaggaaaac
gtaaagagctgctcacattaccgcatcgaatcttgcgacggcatctgccgtgaagaagaa
gccaccgaccattacaacgaaaaagtacatcgggccctacatcacattcgggcgcaaaaa
gaagattttgtcataagggaaaaaggaagaaacgcaaacgagcaggcttttgtatatgta
aaaaacagtacgtatatggggtatggcttcgtcgaccgacaagaacacataagtgccgaa
cacgaactggaaacttttctcgttcagcagaacaacaccttggaaacggagagtattatc
aaatcatatcttagtaagaaccccgataaaatcgtgattttaaacagcgaacatcacaac
gattaa
DBGET
integrated database retrieval system
