Zobellia galactanivorans: ZOBELLIA_3420
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Entry
ZOBELLIA_3420 CDS
T01586
Name
(GenBank) Conserved hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
zga
Zobellia galactanivorans
Pathway
zga03420
Nucleotide excision repair
zga03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ZOBELLIA_3420
03430 Mismatch repair
ZOBELLIA_3420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zga03400
]
ZOBELLIA_3420
Enzymes [BR:
zga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ZOBELLIA_3420
DNA repair and recombination proteins [BR:
zga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ZOBELLIA_3420
MMR (mismatch excision repair)
Other MMR factors
ZOBELLIA_3420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Viral_helicase1
UvrD-helicase
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
CAZ97558
UniProt:
G0L8G9
LinkDB
All DBs
Position
complement(3920290..3921312)
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AA seq
340 aa
AA seq
DB search
MVDKKLILAVAGSGKTTNLIDKLNLTERFYLVTYTITNASLIRLRIIKKFGYLPNNIKVF
TYFNFLYSFCVKPFLYYKYNLKGIFLENSPEPTNYFKNENIRKYISKSGYAYHNRLGKLI
EQENLIDDIKLRLEKFCDHFYYDEVQDLGGHDFNFIIELSKSKVNFLFVGDFYQQTYVTS
FDRNVNGNLHKDYDKYLKRYQDNNITVDLETLSNSWRCSPTICNYITDNLGIQIGSNRTD
LTEITYVEDKDVLTSILNDNAIIKLVFNNASKRTFRAKNWGECKGEDDFIDTCIIMNATT
FNLYKKGTLDKLANRTKNKLYVALSRTRGNCFLVNEKLLG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggttgataaaaaattaatcttagctgttgcaggttctggaaaaactaccaatctaatt
gataagctaaatttaacagaacgattttatttagttacttatacaattacaaacgcaagc
ctaattcgattaagaattataaagaagtttggttacctaccgaataacattaaagtattc
acgtattttaatttcctgtatagcttctgcgtaaagccttttttatactacaaatacaac
ctgaaaggcatatttcttgaaaattcaccagaacctactaattatttcaaaaacgagaat
ataagaaagtatattagtaaaagtggttatgcctatcataataggctaggtaaattaatt
gaacaagaaaatttaattgatgatattaagttacgattggaaaaattctgtgaccacttc
tattacgatgaagtacaagatttaggaggtcacgattttaattttataatagagctatca
aaatcaaaggttaattttctatttgtgggcgatttttatcagcaaacgtacgtaacaagt
tttgatagaaatgttaatggtaatctacacaaagattacgacaaatatttaaaaagatat
caagacaacaatattacagttgacctagagactttaagcaatagttggaggtgcagtcca
acaatttgtaactatatcacagataatttaggaatacaaatcggctcaaacagaactgac
ttaacagaaataacttatgttgaggacaaggatgttttgacctcaatcttaaatgataat
gcaataatcaaattggtgtttaataatgccagcaaaagaacttttagagcgaaaaactgg
ggagaatgtaaaggagaagatgactttattgatacttgtataataatgaatgctactacc
ttcaatttatataaaaaaggaactttagataagttagcaaatagaacgaaaaacaaatta
tatgttgctctatcaaggacacgtggaaattgctttttagttaacgagaaactgttggga
taa
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