Zobellia galactanivorans: ZOBELLIA_7
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Entry
ZOBELLIA_7 CDS
T01586
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
zga
Zobellia galactanivorans
Pathway
zga00300
Lysine biosynthesis
zga00470
D-Amino acid metabolism
zga01100
Metabolic pathways
zga01110
Biosynthesis of secondary metabolites
zga01120
Microbial metabolism in diverse environments
zga01230
Biosynthesis of amino acids
Module
zga_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
zga00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ZOBELLIA_7 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ZOBELLIA_7 (dapF)
Enzymes [BR:
zga01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ZOBELLIA_7 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CAZ94080
UniProt:
G0LCU8
LinkDB
All DBs
Position
complement(5979..6707)
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AA seq
242 aa
AA seq
DB search
MIDNRQLLFPKNDTKLVARLCDRKFGIGADGLILLENDELTDFRMVYYNADGNEGSLCGN
GGRCTVAFAKFLGVIDKETLFNAADGKHRAKVEGGIVSLQMQDVSEIKEKPDYVFLDTGS
PHHVQMVDDIKDFQVFKEGKKLRYGLYGQIGSNINFVEGLNDAGFAVRTYERGVEDETLS
CGTGVTAVAIAMHRAGKVATDTVKIQTQGGELQVKLEERNGVYQNIHLIGPAEQVFKGEI
EC
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgatagacaaccgacagttgttgtttcccaaaaatgataccaaactcgtagcgcgtttg
tgtgatcgaaagtttggcataggggcggacggtcttatcctattggagaatgacgaactg
acagattttcggatggtctactacaatgccgatggaaacgaaggaagtctttgtggtaac
ggaggtcgttgtacggtggcttttgcgaagtttctaggggttatcgataaagagaccttg
ttcaatgcggccgatggtaagcatcgggcaaaagttgaaggcggtatcgttagcttgcaa
atgcaagatgtttcagaaataaaggaaaaacccgattacgtctttttggataccggctca
ccgcatcacgtgcagatggtagatgatattaaggattttcaagtctttaaggaaggaaag
aaattaaggtatggcctttacgggcaaatcggtagcaatatcaattttgtagaggggcta
aatgatgccggttttgccgtaagaacttacgaacggggcgttgaagacgagaccttgtcg
tgtggtacgggcgttaccgcggtggccattgccatgcatcgtgcgggaaaggttgctact
gataccgtcaagatacagacacaagggggcgaacttcaggtgaagctcgaagagcggaat
ggagtgtatcaaaacattcacttgatcggtcctgccgaacaggtgttcaaaggagagata
gaatgttga
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