Candidatus Zinderia insecticola: ZICARI_115
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Entry
ZICARI_115 CDS
T01304
Name
(GenBank) putative pseudouridine synthase, RluA family
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
zin
Candidatus Zinderia insecticola
Brite
KEGG Orthology (KO) [BR:
zin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zin03009
]
ZICARI_115
Enzymes [BR:
zin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
ZICARI_115
Ribosome biogenesis [BR:
zin03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ZICARI_115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
FliH
Motif
Other DBs
NCBI-ProteinID:
ADM89732
UniProt:
E0TIV5
LinkDB
All DBs
Position
107062..107790
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AA seq
242 aa
AA seq
DB search
MLKVQNFNLYKKIRIKKIFEDKYIIIINKPNYLSVHSGYKIKLNLIEFLKKKYNLKLINL
IHRIDKDISGILLLSKSKKILKIINKKFKNKKIKKNYLSIVHGNLNFINKKIKLFFKKNN
NFINKKNYINRNGKKTYSIISLIKIYKNFSLINIKLITGKMHQIRMHLNFLGFPIIFDKK
YGNKKLDKKIYNKYKIKNKKIYLSSNNINFFYIFYKKIINININICNKYFFFINNLFFRN
GV
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaaagtccaaaattttaatttatataaaaaaataagaataaaaaaaatatttgaa
gataaatatataataataattaataaacctaattatttatcagttcattcaggatataaa
ataaaattaaatttaatagaatttttaaaaaaaaaatataatttaaaattaataaattta
atacatagaatagataaagatatatcaggtattttattattatcaaaaagtaaaaaaata
ttaaaaataataaataaaaaatttaaaaataaaaaaataaaaaaaaattatttatctata
gtacatggaaatctaaattttataaataaaaaaataaaattattttttaaaaaaaataat
aattttataaataaaaaaaattatattaatagaaatggaaaaaaaacatattctataata
tctttaataaaaatatataaaaattttagtttaataaatattaaattaataacaggtaaa
atgcatcaaattagaatgcatttaaattttttaggttttccaattatttttgataaaaaa
tatggaaataaaaaattagataaaaaaatttataataagtataaaattaaaaataaaaaa
atatatttatcttcaaataatattaattttttttatatattttataaaaaaataataaat
ataaatataaatatatgtaataaatattttttttttataaataatttgttttttagaaac
ggagtatag
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