Candidatus Zinderia insecticola: ZICARI_196
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Entry
ZICARI_196 CDS
T01304
Symbol
rpoA
Name
(GenBank) putative DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
zin
Candidatus Zinderia insecticola
Pathway
zin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ZICARI_196 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zin03021
]
ZICARI_196 (rpoA)
03400 DNA repair and recombination proteins [BR:
zin03400
]
ZICARI_196 (rpoA)
Enzymes [BR:
zin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ZICARI_196 (rpoA)
Transcription machinery [BR:
zin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ZICARI_196 (rpoA)
DNA repair and recombination proteins [BR:
zin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ZICARI_196 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ADM89800
UniProt:
E0TJ23
LinkDB
All DBs
Position
complement(185901..186575)
Genome browser
AA seq
224 aa
AA seq
DB search
MKINKFIEKKIGINYSLFYLKNLKNGIANIIANFIKKISLNQIKGFCVYKIIFKNIKNEI
SYIKGIKEDIIDIVLNIKNVIFKIKNNKTTFFLKNYFLGPIYAYNIKTLNKNIKILNPSH
LIANAIIKTKLNILIKVKKGKGYINNNEKKKFKYYNKEKKKIVIYLDTNYTPVKKFFFKI
KKKIIKKKYEDLKIYIKTNGILKPKKIIKKSLNIFIKKIKKINI
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaataaatttatagaaaaaaaaataggaataaattattctttattttattta
aaaaatttaaaaaatggtattgcaaatattattgctaattttattaaaaaaatatcttta
aatcaaataaaaggtttttgtgtttataaaataatatttaaaaatattaaaaatgaaatt
tcatatataaaaggaattaaagaagatattattgatattgttttaaatattaaaaatgta
atatttaaaataaaaaataataaaactactttttttttaaaaaattattttttaggtcca
atatatgcttataatattaaaacattaaataaaaatattaaaattttaaaccctagtcat
ttaatagctaatgcaattataaaaactaaattaaatattttaataaaagttaaaaaagga
aagggttatattaataataatgaaaaaaaaaaatttaaatattataataaagaaaaaaaa
aaaatagttatatacttagatacaaattatacacctgttaaaaaatttttttttaaaatt
aaaaaaaaaataataaaaaaaaaatatgaagatttaaaaatttatataaaaacaaatgga
attttaaaaccaaaaaaaattattaaaaaatctttaaatatatttattaaaaaaataaaa
aagattaatatttaa
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