Ziziphus jujuba (Chinese jujube): 107403501
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Entry
107403501 CDS
T04794
Name
(RefSeq) uncharacterized protein LOC107403501 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
107403501
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107403501
Surveillance factors
Other surveillance factors
107403501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
107403501
NCBI-ProteinID:
XP_015865877
UniProt:
A0A6P3YUM8
LinkDB
All DBs
Position
9:complement(join(29652867..29653201,29653299..29653444,29654232..29654304,29654387..29656684,29656773..29657510,29657667..29657807,29657886..29657985,29658138..29658953,29659719..29659813,29659963..29660025,29661017..29661092))
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AA seq
1626 aa
AA seq
DB search
MADRKLSLPDDPLLSKMADGHYSVKNEAMEGNGEEKVQTGLLDEAKDQVASESSIPLSPQ
WLYAKPVDAKSFTTGTSGEMRAPASLPHGNSADPNQRESWRLDGSQDKKDWRRTTPDVEI
NRRWREEERETSLLGRRDRKKDDRRVDVTSTRDVTESRALSSDRWHDSRSSGHDSRRDNK
WSSRWGPEDKEKDARVEKRTDAEKEDTHIDKQSFVNNSRAGSERDSDSRDKWRPRHRQEG
HSGVAPYRAAPGFGLERGQVESSKPRFSLGRGRPTSGSVTLDKSTSILGKGGSSSVKCSY
PRGKLLDIYRKQKTTAPFETLPDGMEIISSIMQVGPIEPLAFVAPDAEEEAVIGDIWKGK
ITSSGVAYNSFRDKDAGSLHDCDGIDNVTLSEGKQKLSINIDQADDSVGEAALKNSFQIT
TAERQMDMFEGVTDGLVPAVSKSYHNTAVDVAGLGNDVDELRGFEDHRVGDFDLLKHPKL
EGVQFTTEIGSQLPDDSSSLFDFSSLQQDWIGDQHHVKSNEDAHVLERVIPPEELSLCYL
DPQGNIQGPFLGIDIIAWFEQGFFGTDLQVRLSDVPDGSPFKELGDVMPHLKSKCDPASR
NNLSDVVGSLEEDISAPASAREYEGSAILNNQHWVSCGSEAASSVGVQSRIPDHGYNSGV
QYQENQSFQDFVAEDEEIVFPGRPQSSKSNMTGSSTDIQGSFSNPSNHQSLANEFSETGL
PNNQDDKLHPFGLMMSELRGSSHLKRAQSSNMSLNTGDQGHFMDPLLGRDASVAGQSLFR
SMTDQHSFGENITMDPNVNRGPVNRKQLPHIGQEYNGFDLAEHVLSQKLLKEQLEQQNNL
SHHSFAHISGMSGEQFPSYGLSRSKSSNIQQSIHHMVPDMEHILELQFQQQQQHQLELQR
RHQLQQQQQHQQQLQQQLQLQQQQMKLQQIQQSQAQQLLLEQLLQHQMSDPGYRQLKVDS
TVDSLFDQVQLRKHLRHELQPKSHSSRHLDPSLEHIFQANAAQRALGGRETDFLDLLSHV
KYGNTLPLEQQHRFQQEELQAQQLSMALRQQLGMEGERRVDGPWLVDEAGQFVRNPAGHH
QAQMLGFNPSENYQHLQRLASHEQQLNHLNWNHTLQERHEQGFYEPNMAFERSSVPVGSP
GMKLDAVNSHVQGLGLQQQNVYAPSFDKLGSISSGVSPHLQQMSDAFYGSHPVAFESSRS
GNNGQLENSSIEARIQQLQLDAERKRMESEATLTFADTNNWASTEGDKKRVLMDILHQKL
GHQRAQSSEVDYQHSLSSTRSRETFFPVSESSSSHLPFNLLPDQQVGMMEGHQNSNISVL
LQGYSGNIGMNEQFNKMVSNEKSLLRSNTGALVEDQSFVSGIRDASHTSFMETALMGKSA
GDEDYLKLEGSKEKRQGMKGMLSVGRLVSEMEGNVADQEEKSFDYGELPSNAHSRHSSMS
STGGSGGFYGYETGLHKSLGEEVSNGRLPSSLPRGFDNASHKSLPVSRVLSSQDVSETAS
ALPVKQTNSMSLASDEGRRGAEGNAAANVSETRASGKKDVRFRRTSSCTDAAVPETSFID
MLKKPVVSEADAAASAGSLEASDGGAQSGRGGKKKGKKGRQIDPALLGFKVSSNRIMMGE
IHRLEE
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atggccgataggaaactcagtctgcccgacgatccccttctctccaagatggctgatgga
cactactctgtcaaaaatgaagccatggaagggaatggcgaggaaaaggtgcaaacgggg
ttacttgatgaggcaaaagatcaagtggcatccgaaagcagcattcctctttctcctcag
tggctttatgctaaaccagttgatgcaaagtcatttactactggcacatcaggagaaatg
cgtgcacctgcttctttgccccatggcaattctgctgatcccaatcagagggaaagttgg
cgattagatggatctcaggacaaaaaagattggcggaggactacacctgatgtggagatt
aaccgtcgctggcgtgaagaggagagagaaacaagtctacttggtaggcgagatcgcaag
aaagatgatcgtcgtgtagatgtcacttcaacgagggatgttactgaaagtagagcattg
tcttctgaccgctggcatgatagccgcagttctggtcatgattcccggagagacaacaaa
tggtcatcaaggtggggtcctgaagataaagagaaggacgctcgagttgagaaaaggaca
gatgctgagaaagaagatactcacattgacaagcaatcttttgttaataacagtcgtgct
ggttcggagcgtgacagtgattctcgtgataaatggaggccaaggcatcgccaagaagga
cactcaggtgtagctccatatcgtgctgcacctggatttggtttggagagaggacaggtg
gaaagctcaaaacctcgattttctttgggacgaggaaggccaactagtgggtctgttact
ctggataagagtaccagtatattgggaaaaggtggttcctcttctgtaaaatgtagctat
ccccgaggaaaacttcttgatatttatcgtaagcaaaagactactgcaccttttgaaacc
ctgcctgatgggatggagattatttcgtcaattatgcaagttggtcctattgagccatta
gcatttgttgcacctgatgctgaggaagaggctgttataggagatatatggaaaggaaaa
atcactagcagtggagttgcatacaactcatttagggacaaggatgcaggatctttacat
gattgtgatggaattgataatgtgactttaagtgaggggaaacagaaactctcaattaac
attgaccaagctgatgactctgttggagaggcggctttgaaaaattcttttcaaattact
actgctgagcgtcagatggatatgtttgagggtgtaactgatgggttggtcccagcagta
tcaaagagctatcataacactgctgtggatgttgctggcttgggcaacgatgttgatgag
cttagaggttttgaagatcatcgggtgggagattttgatcttctgaagcatcccaagttg
gaaggtgtccagtttactaccgaaattggtagccaacttcctgatgattcgagttctcta
tttgatttttcatcattacagcaagactggatcggtgatcagcaccatgtaaagagcaat
gaggatgcacatgtactggaaagagttatcccacctgaggaattaagtttgtgctatctt
gatcctcaaggcaacattcagggaccatttttggggattgacattattgcatggtttgag
caaggcttttttgggactgacctacaagttcgtttgtctgatgtccctgatggctctcca
ttcaaagaacttggtgatgtcatgccacatttgaaaagtaaatgtgatcctgcctcaaga
aataatttaagtgatgttgttggcagtttggaagaggatatatctgctcctgcttctgct
cgtgaatacgagggatctgctattctgaataatcaacattgggtttcatgtggttcagag
gctgcttcaagtgtcggtgtgcagtcaagaatacctgaccatggttataattctggggtc
cagtatcaggaaaaccaaagttttcaagattttgttgcagaagatgaagaaattgtcttt
cctggaaggcctcaaagtagcaagagtaacatgacgggatcttcaactgacattcaggga
tcattttcaaacccttccaaccatcaatcccttgcaaatgaattttcagagactggctta
cctaataatcaggatgataagttgcatccatttggcctaatgatgtctgaacttagagga
agctctcatttgaagcgtgctcaatcatccaatatgtctttaaacactggtgaccagggg
cactttatggatcctttgcttggacgagatgcatccgttgccggtcagagtttgtttagg
tctatgactgatcaacattcttttggagagaatataactatggatccgaatgttaatcga
ggtcctgtaaatcgtaaacagttgcctcacatagggcaagaatacaatggttttgacctg
gctgagcatgtgctatcacagaaattgctgaaggaacaacttgaacagcagaataatctt
tcacatcattcctttgcacatatttcagggatgagtggagagcaatttccaagttatggt
ctttctcggagcaagagctctaatatccagcaatccatacatcatatggtgcctgatatg
gaacatattttagaacttcagtttcagcagcagcagcaacatcagttggagcttcagcgg
cgtcatcaattgcagcagcagcaacagcatcaacagcaattgcagcagcagcttcagctt
cagcagcaacaaatgaaattacagcagatacagcagtctcaagctcagcagttgcttctt
gagcaattgctgcagcatcagatgtctgatcctggttatagacagcttaaggtagattct
acagtagatagcctgtttgatcaagttcaattaagaaagcaccttcgtcatgaactacag
ccaaaatctcattcttcaagacaccttgatccatcactagagcatatttttcaagcaaat
gctgcccaacgagcccttggaggacgggagactgattttttggaccttctatcacatgta
aaatatgggaatacgctccctctagaacagcagcatcgctttcagcaagaagagttgcag
gcacagcagttatctatggcattgagacagcagttggggatggagggcgagaggcgtgtt
gatggaccttggttggtagatgaagcaggtcaatttgtcaggaatcctgctggtcatcac
caggctcagatgttaggatttaatccttcagaaaattatcagcatctgcagaggctggcc
tcccatgaacagcaactaaaccatctcaactggaatcatacactgcaggagcgacatgag
cagggattttatgaacctaacatggcatttgagaggtcgtcagttccagttggttctcct
gggatgaagttggatgcagtaaattctcatgtccagggtctaggcttgcagcagcaaaac
gtttatgcaccttcttttgataaattgggttcaatttcctctggtgtttcccctcacctt
caacaaatgtcagatgcattttatggttctcatccagttgcttttgagagctccaggtct
ggcaacaatgggcagctagaaaatagctctattgaagcaaggatacaacaattgcagctt
gatgctgagcgaaagcggatggagtcagaagctactttgacttttgcagatacaaataat
tgggcatcaactgaaggtgataaaaaacgagttttaatggatattcttcaccaaaaactg
ggtcatcaacgtgcgcagtcatcagaagttgattatcaacattctctatcatctaccaga
agccgggaaaccttttttccagtttctgagtcaagctcctcacatcttccttttaatctc
ctcccagatcagcaggttggtatgatggagggtcatcagaattccaatataagtgtcttg
ttgcaaggttattctggcaacattggcatgaatgaacaatttaacaagatggtgagcaat
gagaaatcgcttcttagatctaatacaggagcattggtggaggaccagtcatttgtgtct
ggtattagggatgcttctcatactagttttatggagactgccttgatgggtaaatcagct
ggtgatgaagactatttgaagttggaaggaagtaaggaaaagagacaggggatgaaaggc
atgctctcggtgggcagattagtttcagagatggaaggcaatgtagctgaccaagaagaa
aaatcctttgattatggggaactacctagcaatgctcatagcaggcacagctcaatgagc
agtactggtggcagtggaggcttttatggctatgagacgggattacataaatcgcttgga
gaagaggtttctaacgggcgattgccttcttctctaccaagagggtttgacaatgcttca
cacaaatccttgcctgtgtctcgggtgctatcttcccaggatgtctctgaaacagcatca
gctctgcccgtcaagcagacaaactctatgagccttgcttctgatgaagggaggcggggt
gctgaagggaatgcagctgcaaatgtctctgaaactagggcatcgggcaaaaaggatgtg
cgttttaggaggacctcgtcttgcactgatgctgctgtgcctgagacatcattcatagac
atgctgaaaaaaccagtagtttcagaggctgatgcagcagccagtgcaggttctctggag
gcatctgatggcggtgcccaatcaggacgaggtggcaaaaagaaagggaagaaaggaaga
cagattgatcctgctctccttggttttaaggtctcaagtaaccggatcatgatgggtgaa
attcatcgactagaagaatga
DBGET
integrated database retrieval system
