KEGG   Ziziphus jujuba (Chinese jujube): 107403521
Entry
107403521         CDS       T04794                                 
Name
(RefSeq) small RNA degrading nuclease 3 isoform X1
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    107403521
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:zju03009]
    107403521
Ribosome biogenesis [BR:zju03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    107403521
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 Csm1_N BBS7_hp
Other DBs
NCBI-GeneID: 107403521
NCBI-ProteinID: XP_015865909
UniProt: A0A6P3YUQ2
LinkDB
Position
7:complement(join(13005354..13005755,13005889..13005996,13006232..13006339,13006430..13006561,13006990..13007090,13007250..13007319,13007399..13007515,13007722..13007862,13008484..13008552,13009078..13009167,13009293..13009475,13010094..13010126))
AA seq 517 aa
MDELIDTAEKKVLVDIVKMVQKRGMKGTKGDWKEFLNSYDKKFGSSLSDPARRSNDVLAS
FLKTFDKENDLKFLANVMQCCSNRKLVDELAKRNPDKETPVQRLVCLTLQHPQYALEYAF
PSYEEGWVVTKLCKKSKVRRSDDMVAIDCEMVECVDGTEALVKICVVDRNLEVKLDKLVK
PNKGVANYRTEITGITDADLDGVTCSLADIQKSMKKLLSNGTILVGHSVNNDLKVLKVDH
AWVIDTSLIFKYSDGPTFRRPSLNNLCKSVLGYEVRQKGAPHNCLDDACAAMKLVLAKID
LQVANISIIDEDVPETNMAKLLLHRIPVHMPSEELHKIMPGNFTIEVKQPSKKPQGDKYS
VYVVYKNSQEAQQAYEDVKGNQEKDSYGRPQKLVTFQLSTGIVGNLYVRKMAHDDSVQQV
SSKKRALQVEENSVMSKKLITERTILKENLADSKQLCDHLKEIESLKEQLKQTSDQCSDH
LEEIERLKQELGNRDFEISVLNKMVSKLQKDKKLKKK
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggacgaactaatcgacactgctgagaaaaaggtccttgttgacattgtgaagatggtt
caaaaaagaggcatgaagggtactaaaggagactggaaggagtttttaaatagttacgat
aaaaagtttggatctagcttaagcgatcctgcaaggagatccaatgatgttttggcttct
ttcttgaagacatttgataaagagaatgatttgaagtttttggctaatgtaatgcaatgc
tgttcaaatcgcaaattagttgatgaattagcaaaaagaaatccagataaagaaacccct
gtgcagagattggtttgtttaactcttcaacacccacaatatgcgttagagtatgcattc
ccttcatatgaggagggttgggtagttacaaagctctgcaagaagtccaaggtgaggagg
tcagatgatatggttgccattgactgtgagatggttgaatgtgttgatggaactgaagct
ttagtgaaaatatgtgttgtggaccgaaacttagaggtcaaattggataaacttgtgaaa
cctaataaaggagtagcaaattacagaactgagattacaggcattactgatgcagatttg
gatggagttacatgttcattggcagacatacagaaatccatgaagaagttattgtcaaat
ggaactattttggtgggccacagtgtaaataatgacctaaaagtgttaaaggtagatcat
gcatgggtgattgatacctcattaatcttcaaatattcagatggacctacttttagaaga
ccttctttaaataatttgtgcaagtctgtgttggggtatgaagttaggcagaagggtgct
ccacacaactgtctagacgatgcatgtgctgcaatgaaacttgtccttgccaagatagat
ttgcaagttgctaatatatccataattgacgaggatgtacctgaaacaaacatggcaaag
ctacttcttcataggataccagtacatatgcctagtgaagaactacataaaatcatgcct
ggcaactttacaattgaagtcaagcagccatctaagaagccgcaaggagataaatattct
gtgtatgtcgtctataagaattcacaagaagcgcagcaagcatatgaagatgttaaaggc
aatcaagaaaaggactcgtatggacgaccacaaaaacttgtcacatttcagctcagcaca
ggcatagttggtaatttatatgtccgtaagatggcccatgatgactccgttcagcaagtt
tcatctaagaagagagctttgcaagttgaagagaattcagttatgtcaaagaaactgata
acagaacggacaattttaaaggagaatttggcagattcaaagcagctttgtgatcacctt
aaagaaattgaaagtttgaaggaacaactgaagcagacttctgatcagtgttctgatcac
ttggaagagattgaaagactgaagcaagagctggggaacagggattttgaaatctctgtg
ctaaataagatggtatcgaagttgcaaaaggacaagaaattaaaaaagaaatag

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