Ziziphus jujuba (Chinese jujube): 107403965
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Entry
107403965 CDS
T04794
Name
(RefSeq) rhomboid-like protein 20
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zju04121
]
107403965
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
107403965
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UBA
UBA_7
Rhomboid
UBA_RAD5A
CUE
Motif
Other DBs
NCBI-GeneID:
107403965
NCBI-ProteinID:
XP_015866381
UniProt:
A0A6P3YWH2
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All DBs
Position
11:complement(join(5126719..5126883,5127342..5127464,5127848..5127949,5128066..5128217,5128841..5128907,5129701..5129841,5130823..5130923,5131065..5131089))
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AA seq
291 aa
AA seq
DB search
MNGGPSGFNNAPVTRTFLIACALFTVFFGIQGRSSKLGLSYLDIFGKLRIWKLIMSVLAF
SSTPELIFGLYLLYYFRVFERQIGSNKYSVFILFSLTVALLFEVFALALLKDPAANLVTS
GPYGLIFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWKRSILPGLCGIL
AGSLYRLNLFRIRRAKFPEFVASFFSRLSWPSVGNPPAAPTRNVVGNAPSYTGHQVERNY
PSMPTSTEPPEDSIATLVSMGFDRNAARQALVHARNDVNTATNILLESQSH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggtccatctggtttcaacaatgctcctgttacaagaaccttccttattgct
tgcgctctgttcaccgtcttcttcgggatccaaggtcgttcttctaagctcggattgtcg
tatctggatatttttgggaagcttcgcatttggaagttgatcatgtctgttcttgccttt
tcgtctacgccagaactcatatttggattgtatctgctatactacttcagggtctttgag
agacaaattggttctaacaagtactcggtctttattttgttttctttgacagttgcatta
ctctttgaggtcttcgctcttgcactccttaaagatcctgctgcaaaccttgtcacttct
ggaccttatggtcttatatttgcatcatttgtaccatttttctttgacattccagtttca
acacgttttcgtgtatttggtgtgcgcttttctgacaagtccttcatttatctagctggt
ctccagcttcttttatcatcctggaaaaggtctatcttgccagggctttgtggcatcctt
gctggttccttgtatcgcctgaatctcttccgtattcgcagggcaaagttcccagagttt
gttgcttcattcttttcacggctttcttggccatcagttggaaatccaccagcagcgcca
actcggaatgttgtgggtaatgcaccatcatatacaggtcaccaagtggagagaaattac
ccttcaatgccaacttccacagagccacctgaagactcgattgccaccctagtttctatg
ggttttgaccggaatgctgctagacaggcacttgtgcatgcaaggaatgacgtcaatacg
gccacaaacatccttcttgaatcgcagtcccactga
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