KEGG   Ziziphus jujuba (Chinese jujube): 107404055
Entry
107404055         CDS       T04794                                 
Name
(RefSeq) ATP-dependent helicase BRM
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107404055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zju03021]
    107404055
   03036 Chromosome and associated proteins [BR:zju03036]
    107404055
Transcription machinery [BR:zju03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     107404055
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     107404055
  Chromatin remodeling factors
   BAF complex
    107404055
   PBAF complex
    107404055
   GBAF(ncBAF) complex
    107404055
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD Bromodomain HDA2-3 AAA_14
Other DBs
NCBI-GeneID: 107404055
NCBI-ProteinID: XP_015866481
UniProt: A0A6P3YSD5
LinkDB
Position
11:complement(join(19731913..19732551,19733025..19733276,19733586..19734131,19734223..19735797,19735881..19736123,19737355..19737558,19737652..19737735,19737814..19737906,19738101..19738187,19738286..19738373,19738595..19738707,19738873..19740201,19740379..19741704,19743333..19743572))
AA seq 2272 aa
MQSAGGGGGGPSRNPGTGPAGRAASTSSAASPSSSSSAVSAPHLGFDPIQQQQQQQQQQQ
QHQHQQQQQQQQQQQIGSRQLLRKPDGNEALLAYQAGSLQGVLGVSNFSSSPTAMQLPQQ
SRKFFELAQHHGSSQEGQNRSQGAEQQMLNPVHQAYLQYAFQTAQQKSALAMQSQQQAKM
GLLGPPSGKDQDMRMGNMKMQELISMHAASQVQASSSRNSEQVARGEKQMEQGRPPASDQ
RGESKPSIQPAVIGQLMPGNIIRPMQVPQSQQTLQNMANNQLAMTQLQLVQAWALEHNID
LSQPGSANLVAQLIPLVQSRMASQQKANESNMGAQSLSVPVSKQQVTSPPVASENSPHAN
SSSDVSGQSGPAKAKQTVSPVPFGSTSNAAIVSNSNNMTVQQFASHGRENQVPPRPSVVS
GNGMPLMHPPQSSPSTSQGMDHSLHAKNPLSSSESMQMQYIRQLNRSSPQAAAAAATVDR
ASGSHVQSQGGPASNMSQQRFGFTKQQLHVLKAQILAFRRIKKGEGSLPQELLRAIAPPP
LELQLQQQFLPGGGNNPDKSAGKVVADRARHMESSEKDAQSVASVNEQNISKEEAFTRDD
KASVSTGHVQGTPVMMKEPGPVVSSGKEEQPTVFPVKSDHEVERVAQKAPVRSDIPVDRG
KAVAPQVAVSDAMQVKKPSPTNTASQSKDSISARKYHGPLFDFPFFTRKHDSFGSGMLVN
NNNNLTLAYDVKDLLFEEGVEVLNKKRTENIKKIGGLLAVNLERKRIRPDLVVRLQIEEK
KLRLLDLQTRLRDEIDLQQQEIMAMPDRPYRKFVRLCERQRMELARQVQVSQKAMRDKQL
KSIFLWRKKLLEAHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRNKRMEALKNNDVD
RYREMLLEQQTNIPGDAAERYAVLSSFLSQTEEYLHKLGGKITAAKNQQEVEEAANAAAS
AARLQGLSEEEVRAAAACAGEEVMIRNRFMEMNAPRDSSSVNKYYNLAHAVNERVLRQPS
MLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHL
IIVPNAVLVNWKSELHNWLPSVSCIYYVGGKDQRSKLFSQEVCALKFNVLVTTYEFIMYD
RSKLSKIDWKYIVIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNL
LLPEVFDNRKAFHDWFSKPFQKEGPTPSAEDDWLETEKKVIIIHRLHQILEPFMLRRRVE
DVEGSLPPKVSVVLRCRMSAIQSAIYDWIKSTGTLRVDPEDEKRRVQKNPIYQAKVYKTL
NNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMT
KLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPNTDCFIFLLSIRAAGRGLNLQ
TADTVIIYDPDPNPKNEEQAVARAHRIGQTREVKVLYMEAVVDKISSHQKEDELRSGGTV
DSEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHD
EERYQETVHDVPSLQEVNRMIARSKEEVELFDQMDDELDWTEEMTSYNQVPKWLRASTRE
VNAAIANLSKRPSKTLLGGNIGVESSEMGSDSSQKTERRRGRPKGKKHPNYKELDDENGE
YSEASSDERNGYSMHEEEGEIGEFEDDEFSGAVGAPPVNNDQVEEDGPGCDGGYEYPRAP
EGMGTNHVLEEAGSSGSSSDSRRLTQMVSPSVSSQKFGSLSALDGRPGSVSKRLPDDLEE
GEIAVSGDSHMDHQQSGSLIYDRDEAEDEQVLQPKIKRKRSLRVRPRHTVERPDEKSNNE
IPSLQRGDSSLLPFQVEHKYQSQLRSDSEMKTYGDPNAIKHEQSDSSSKNRRNLPSRRIS
NASKSHASPKVTRLNPLSGPAEDATEHPRENWDGKAVNSSSASVLGVKMPEIIQRRCKNV
ISKLQRRIDKEGHQIVPLLMDLWKRIENSGYMTGSGNNLLDLRRIDQRIERLEYSGVMEL
VFDVQSMLKGAMHFYGFSHEVRSEARKVHDLFFDILKIAFPDTDFREARNSLSFSSPISA
AAAPSPRQAAVGQSKRQKFITDMEPDPNPPQKPQQRGPIISGEETRLRGIKESRHGSGSS
REQFQPDDSPLHPGDLVICKKKRKDREKTVVKARTGSAGPVSPPSVGRSIRSPVSGSAAK
ETRLTQQTTHSQGWANQAAQPGNAAAAGGSVGWANPVKRLRTDSGKRRPSHL
NT seq 6819 nt   +upstreamnt  +downstreamnt
atgcaatctgctggtggtggtggtggtgggcccagccggaatccggggacgggaccggca
gggagggcagcatcgacttcatcggctgcgtcaccgtcttcgtcgtcatctgcagtgtcg
gcgccacacttgggttttgatcccatacagcagcagcagcagcaacaacaacagcagcag
cagcatcagcatcagcaacagcaacagcaacagcagcagcagcaaatagggtctaggcag
ttactaagaaaacctgatgggaatgaagcccttctagcgtatcaagctggcagtcttcaa
ggagttttgggagttagcaatttttcttcatctcccactgctatgcaactgcctcaacaa
tcaaggaaattctttgagttggctcaacaccatggttcctcccaggaaggtcagaatagg
agtcaaggggctgagcagcaaatgctaaatccagttcatcaagcttatcttcaatatgct
tttcagactgcacaacagaagtcagctttggcaatgcaatcacagcagcaagctaaaatg
ggattgttgggacctccatctggaaaggatcaggatatgcgaatgggaaatatgaaaatg
caagaactcatttctatgcatgcagctagtcaggtacaagcatcgtcatccaggaattca
gaacaggttgctcgtggagagaagcagatggagcaaggacggccaccagcttctgaccaa
aggggtgagtctaaaccatcaatccagccagcagtcattggacaattaatgcctggaaat
atcataagacctatgcaggttccacagtctcagcaaaccttgcaaaacatggcaaataac
cagcttgcaatgactcagctgcagctagttcaggcatgggcacttgagcataacattgat
ctttcacaacctggaagtgccaatttggtggcacagcttattccacttgtacaatctagg
atggctagtcaacaaaaagcaaatgaaagcaatatgggtgcacaatcattgtctgtccca
gtgtcaaagcagcaagttacttctcctccagttgcaagtgaaaattcgcctcatgctaat
tcgtctagtgatgtatctgggcagtcaggaccggcaaaagccaagcagacggtttcacct
gtcccttttggctcaacatctaacgctgctattgttagcaatagtaacaacatgacagtt
cagcagtttgcttctcatggcagagagaatcaagtgcctcctagaccttcagttgtatct
ggaaatggaatgcctttaatgcatcccccgcagtcatctccaagtacgtcccagggtatg
gaccactctttgcatgcgaaaaatccattaagcagctcggaaagtatgcaaatgcaatac
attaggcagttgaatagatcttctccacaagctgctgctgctgctgctaccgttgacagg
gcttcaggcagccacgtccagtcacaaggtggaccagctagtaacatgtcacaacagcga
tttgggtttaccaaacaacaactgcatgttcttaaagcacagatactagcatttaggcga
attaagaaaggagaaggtagtcttccacaagagcttcttcgggctatagctccaccacca
ttggagctgcagctgcagcagcaatttcttcctggtggaggaaacaatcctgataaatct
gctgggaaggttgtagcagaccgtgcaagacatatggaatcaagtgaaaaagatgcacag
tctgtggcatcagttaatgaacaaaatatttcaaaagaagaagcatttacaagagatgat
aaagcatctgtatcaactggtcatgtgcagggtacaccagtaatgatgaaggaacctgga
ccagttgtttcttctggaaaagaagagcagcctactgtttttcctgtcaagtcagaccat
gaagttgaacgtgttgcccaaaaagctcctgttagaagtgatataccagtagatagggga
aaagctgttgcacctcaggtagctgtgtctgatgcaatgcaagttaaaaaaccttcacca
acaaacacggcatcccagtcaaaagattctatctctgccagaaagtatcatgggcctcta
tttgattttcccttcttcactaggaaacatgattcctttggttcaggaatgttggtaaac
aacaacaacaatctaacattggcatatgatgtcaaagatcttctttttgaggaaggtgtg
gaagtgcttaacaagaagaggacagaaaatataaagaagattggaggtttactggctgta
aatttggaaaggaaaaggattaggccagatcttgtggtgcggttgcagattgaagagaaa
aaacttagacttttagatctacagacacgattaagggatgaaatagatttacagcagcag
gagataatggcaatgcctgataggccctataggaaatttgtgagattgtgtgagcgccag
cgcatggagcttgctagacaagtgcaggtgtctcagaaagccatgagagataagcagctg
aaatccatttttctatggcgtaaaaaacttcttgaggctcactgggccatacgagatgca
cgtactgctcgcaaccggggagttgctaaatatcatgaaagaatgttgagggagttttca
aagagaaaggatgatgatcgtaacaaaaggatggaagcattgaagaataatgatgtcgat
aggtatagagagatgttactggaacaacagactaacattccaggggatgcagcagagaga
tatgctgttctctcatcattcttgtctcagacagaagaatatctacataaactgggaggt
aaaataacagctgccaagaatcagcaggaagtggaggaggcagcaaatgctgctgcatct
gctgcacgattgcagggtctctcagaggaagaagttagggcagcagctgcttgtgctggt
gaggaggtgatgataagaaatcggtttatggaaatgaatgcacccagagatagctcatct
gttaacaagtattacaatcttgcacatgctgttaatgaaagggtcttaaggcagccctcc
atgttacgagctggaaccctaagagactatcagcttgttgggttgcagtggatgctttcg
ttgtataacaacaaattaaatggaattttggctgatgagatgggccttggaaagactgta
caggtaatggcattgattgcttatttgatggagttcaaagggaactatggcccacatctc
ataatagttccaaatgctgttttggtgaattggaagagtgagctccataattggctgcca
tctgtgtcatgcatctattatgttggtgggaaggatcaacgatcaaaattattttctcaa
gaggtctgtgctttgaagttcaatgtccttgtgacaacttatgaattcatcatgtatgat
cgttcaaaactttcaaaaatagattggaaatacattgtaattgatgaagcacaaaggatg
aaggacagagaatcagttttggcacgtgatcttgatagatatcgttgccagaggcgtctg
cttctcactgggacaccattgcagaatgatttgaaggaactctggtcacttttgaatctt
cttcttcctgaggtatttgataatcgtaaagcatttcatgactggttctcaaaacccttc
caaaaagaaggccctacaccgagtgcagaagatgactggctagagactgaaaagaaagtt
atcatcatccaccgacttcatcaaatattggagccatttatgctgagacggcgtgttgaa
gatgtggagggttcacttccaccaaaggtttccgtagttctaagatgtagaatgtcagct
atccagagtgctatttatgattggatcaaatctactggtactcttcgagttgatcctgaa
gatgagaagcgcagggttcagaaaaatccaatttaccaggctaaggtgtataaaacctta
aataacaggtgcatggagctgcgaaaagcttgtaatcatcctttgcttaattacccttat
ttcaatgacttttcgaaagattttctggtgagatcttgtgggaaattgtggatcctagat
cggatacttattaaacttcagagaacagggcatcgagtactgcttttcagtaccatgaca
aaactccttgatatattggaggaatatttgcagtggcggcgacttgtctataggcgaatt
gatggaacaactagtttagaagatcgtgaatcagccatagtggacttcaatagtcctaat
acagactgctttatctttttgcttagtattcgtgctgctggtcggggtcttaatcttcag
actgctgatactgtgataatatatgatcctgatccaaatcctaaaaatgaagaacaggca
gttgctagagcccaccgcattggacagacgagagaagtcaaagtcctttatatggaagcg
gttgttgacaaaatctctagccatcaaaaagaagatgaactgcgaagtggaggtacagtt
gattcggaggatgaccttgctggtaaggatcgatacattgggtctattgagggccttatc
aggaacaacattcaacaatataagatagacatggctgatgaggtcatcaatgccgggcgt
ttcgaccagagaacgacacatgaggagagacgcatgacattggagacgttgttgcatgat
gaggagaggtatcaagaaactgtccatgatgttccctcactgcaggaggtaaatcgtatg
attgctagaagtaaagaagaagttgaattatttgatcagatggatgatgaactggattgg
actgaggagatgacaagctataaccaggtacctaagtggcttcgagccagtactagagaa
gtaaatgccgccattgctaatttgtcaaaaaggccatcaaagaccttattgggtggtaat
attggtgtggaatccagtgaaatgggttctgattcatctcaaaagactgaaagaagaagg
gggcggcccaagggtaaaaagcatcctaattacaaggaattggatgatgaaaatggagaa
tactcggaagcaagttccgatgagaggaatggatattctatgcatgaggaagagggagaa
attggagaatttgaagatgatgaatttagtggtgctgttggagcaccacctgtcaataat
gatcaagtggaagaagatggtcctggttgtgatggtggatatgaatatcctcgggctcca
gaaggaatgggaactaatcacgtacttgaagaagctggttcttcagggtcatcctcagac
agtcgaagattgacacagatggtgtctccttcagtttcttcgcagaaattcggttctctg
tctgccttagatggtaggccaggttctgtctcaaaaaggctgccggatgatctagaggaa
ggggaaattgcagtatctggagattctcatatggaccaccaacaatctggaagtttgata
tatgaccgtgatgaggctgaagatgaacaagttttgcaacccaagataaagaggaagcgt
agtctacgggttcgccctcgtcatactgtggaaaggccagatgaaaaatctaacaatgag
ataccatctcttcaacgtggagattcatcactgttgccattccaagtggaacataagtat
caatcacagttaaggtccgactctgaaatgaaaacatatggagatcccaatgctataaag
catgagcaaagtgattcatcctcaaaaaataggcggaatttgccttcaaggaggataagc
aatgcttcaaaatcacatgcttcaccaaaagttacaagactgaatcccttgtctggtcct
gctgaagatgctactgaacatcccagagaaaattgggatgggaaagctgtaaattcaagt
agtgcttcggttttaggtgtgaaaatgcctgaaatcattcagagaaggtgcaagaatgta
attagtaagctccaaaggcgaatagataaggaaggtcatcaaattgtaccattgctcatg
gatttgtggaagcggattgaaaattctggttatatgactggatcggggaataatctcttg
gatttacgaaggatcgatcagcgtatagagagattagagtatagtggagtcatggagctg
gtatttgatgtgcagtcgatgttgaaaggtgcaatgcatttttatgggttctcacatgag
gtaagatctgaagccaggaaagtacatgatcttttcttcgatatcttgaaaattgcattt
ccagacacagattttcgagaagccagaaattcactttcattttctagccccatttctgcc
gctgctgctccatcccctaggcaggcagctgttggccaaagcaagagacaaaagttcata
actgatatggaacctgaccctaatcctccacagaagcctcagcaacgaggacctattatt
agcggtgaagaaacaagattgagaggcattaaggaatcgagacatggaagtggaagtagc
cgggagcaatttcagccggatgattctcccctgcatccaggagaccttgtaatttgcaag
aagaaaaggaaagacagggagaagactgtggttaaggcgaggactggatcagctggccct
gtttcaccccctagtgtgggtcgtagcatcagaagtccagtgtctggttcagctgcaaag
gagacgagactgactcaacaaaccactcattcacaagggtgggctaaccaggctgctcaa
cccggaaatgcagcagcagcagggggttctgttggttgggcaaaccctgtaaagagatta
aggacagattctgggaagaggaggccaagccatctatga

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