KEGG T04794: 107404210

Ziziphus jujuba (Chinese jujube): 107404210

Entry

107404210         CDS       T04794

Name

(RefSeq) DNA-directed RNA polymerase III subunit 2 isoform X1

K03021

DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]

Organism

zju Ziziphus jujuba (Chinese jujube)

Pathway

zju03020

RNA polymerase

Brite

KEGG Orthology (KO) [BR:zju00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107404210
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zju03021]
    107404210
Enzymes [BR:zju01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     107404210
Transcription machinery [BR:zju03021]
Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     107404210

SSDB

Motif

Pfam:

RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 Pox_LP_H2

Other DBs

NCBI-GeneID:

107404210

NCBI-ProteinID:

XP_048325768

LinkDB

Position

8:join(2872747..2872796,2872923..2873046,2873141..2873262,2873690..2873782,2874041..2874113,2874184..2874274,2874373..2874425,2875396..2875460,2875558..2875663,2875770..2875880,2876026..2876082,2876619..2876675,2876805..2876855,2876952..2877050,2877536..2877595,2877677..2877769,2879053..2879154,2880761..2880871,2880974..2881090,2881453..2881569,2881737..2881817,2883403..2883507,2883582..2883662,2883760..2883891,2883968..2884012,2886776..2886853,2886922..2887061,2887247..2887337,2887792..2887910,2888040..2888175,2888265..2888395,2888602..2888727,2888813..2888868,2888980..2889050,2889789..2889873,2889958..2890061,2890406..2890534,2890771..2890821)

AA seq 1170 aa
MGVQRESVAGFPGHNLPLNNGTQIPNSPVKGLAIDKQVLAAPIKSAVEKYQLLPEFLKVR
GLVKQHLDSFNYFVNTEIKKIVRANNRIESSLDPSIYLRFKDIRIGEPSVTLDGVSENLN
PHTCRLSDMTYAAPIKVDVEYIEGSHGQKTRAQKENVVIGRMPIMLRSCCCVLYGKDEAE
LARLGECPLDPGGYFIIKGTEKVILIQEQLSKNRIIIDMDKKGNINASVTSSSETIKSKT
TIQMEKGKLYLILSQFSTKVPIMVVMKAMGMESDQEVVQMVGRDPRYSALLMPSIEECGK
DIHTKEQALDYLESKLKRSMYPPSAHAPNASSEKAGRVMTILKDVFLANVRVHQNNFRPK
CIYVGVMLRRIMDAILNKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMITDVKRTVDS
ILAKPSRSSRFDFAQWIVRDNITNGLERALSTGNWDVKRFKMNKKGVTQVLGRLSFIGTL
GHMTRINPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEE
PLISLFYCLGVEDLELLSGEELHAPNSFLVIFNGHILGKHRRPQRFATAIRMLRRAGKIG
EFVSVFLNEKQRCVYIASDGGRVCRPLVIADKGISRIKEHHMKELLDGVRTFDDFLREGL
IEYLDVNEENNALIALYEADATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAM
GKQAMGNIAYNQLSRMDTLLYLLVYPQKPLLTTRTIELVGYDKLGAGQNATVAVMSYSGY
DIEDAIVMNKASLDRGFGRCIVMKRLSAIIQKYENNTQDRIARPNRAGNDAGRMQVLDDD
GIAAPGEIIRPNDIYINKQTPRVTRGTMVTGLTDSDFKFAPQTFKGPIGESSVVDKVALF
TDKNNNMCIKYLIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPH
GFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISHTLVEKGFSYNGKD
FIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRV
GEMERDCLIAYGASMLIFERLMISSDPFEVQVCRACGLLGYYNHKLKTGICSSCKNGDNI
STMKLPYACKLLIQELQSMNIVPRLKLAEA

NT seq 3513 nt +upstreamnt +downstreamnt
atgggcgtccaacgagaatccgttgctggcttccccggacataacctaccgttgaataat
ggcactcagattcccaattctccggttaaaggcttggccattgacaagcaagttctggcc
gctccaattaaatccgccgttgaaaaatatcagcttcttcctgaatttttaaaggttaga
ggtttagtgaagcaacatttggactcgtttaactattttgtgaatacggaaattaaaaag
attgttcgtgccaataatcgtattgaatccagtctggatccaagcatttatctcaggttc
aaagatattagaattggtgagccctcagtgacgctggatggtgtcagtgaaaaccttaat
ccacatacatgccggttatctgacatgacgtatgctgctccgataaaggttgatgtagaa
tacattgaaggaagtcatggtcaaaagactagagcgcaaaaggaaaatgttgttattgga
agaatgcctataatgttacggagttgctgctgtgttttatatggaaaagatgaagctgag
cttgcaagactaggtgagtgccctcttgatcctggaggatattttatcatcaaaggaaca
gagaaggtaattctcatacaagaacaactttcaaagaataggattattattgatatggac
aagaagggaaacataaatgcttctgttacgagcagttctgagacaataaaaagcaaaact
actattcagatggaaaaggggaaattgtatttgattctcagccaattcagcactaaggtt
cctataatggtggtcatgaaggctatgggaatggagagcgatcaagaagtagtgcaaatg
gttggaagagatcctcgatatagtgctctccttatgccatcaattgaggaatgtggaaag
gatattcatacaaaagagcaagccttagactatttagaatcaaagctgaagaggtccatg
tatcctcctagtgcacatgctcctaatgcttcttctgaaaaggctggtagagtaatgaca
atccttaaagatgtgtttcttgccaatgttcgggtgcatcagaataattttcggccaaaa
tgcatatatgttggggtaatgctgagacgcataatggatgcaattttaaacaaggatgca
atagatgacaaggactacgtagggaacaagaggctggaattatctggtcaattgatttcg
cttctttttgaggatttgttcaagacgatgattactgatgttaagaggactgtagattct
attttggcaaagcccagcaggtcaagtcggtttgactttgctcagtggatagttagagat
aatatcacaaatggccttgaaagggccctttcaactggaaactgggatgtcaaacggttt
aagatgaacaagaaaggcgtgacacaggtgctaggtcgattatcttttattggcactctg
ggccatatgaccagaatcaacccacaatttgagaaatcacggaaagtaagtggacctaga
gccttgcaacctagtcagtggggcatgctttgcccatgtgatactcctgagggtgaagct
tgtggactagttaaaaacttggccctaatgactcatgtgacaactgatgaagaggaggag
ccattaatctccctgttctattgcttgggtgttgaggacttggaattactctctggagag
gagcttcatgcaccaaattctttcctagttatattcaatgggcacatcctcggaaagcat
cggagaccacagcgttttgccactgcaatcagaatgttacgcagagctgggaaaattggg
gagtttgtaagtgtctttctcaatgagaagcagcgctgtgtttatattgcttctgatgga
ggtcgagtttgtcgtccactggtcattgctgacaagggcatatcaaggatcaaagaacat
catatgaaggagttgttggatggagtgcgaacatttgatgactttttacgtgaggggttg
attgagtatcttgacgttaatgaggagaacaatgctttgattgctttgtatgaagcggat
gctaccccagagacaacacatattgagatagagccatttaccatcttaggtgtttgtgct
gggctaattccatatcctcatcacaatcagtcacctagaaatacttaccagtgtgcaatg
ggaaagcaagcgatgggaaatattgcatataaccagctatctcgaatggacacattgctc
tacctactggtgtatcctcaaaaaccattattgacaacaaggactattgaactggttggc
tatgataagcttggagcagggcagaatgcaacagtcgctgtgatgagttatagtggctat
gatatagaggatgcaatagtcatgaacaaggcatctcttgatcgtggatttggtcgttgt
attgtcatgaaaaggctttcagccatcatacaaaagtatgagaataacactcaagacagg
atcgccagacccaacagagcaggaaatgatgctggaaggatgcaggtgctggatgacgat
ggaattgcagcccctggggaaattattagaccaaatgacatatatattaacaaacaaact
cccagagttacgagggggactatggtgacggggttaactgatagcgatttcaagtttgct
cctcagacattcaaaggtcctataggggaatcaagtgtggtggacaaagtggctcttttt
actgacaaaaataataatatgtgcatcaaatacttaattcgtcatactcgtagacctgag
gttggtgataaatttagtagcagacatgggcaaaaaggtgtttgtggaaccattgtccaa
caggaagatttccccttttctgagcgtggcatttgccctgatttaattatgaatcctcat
ggatttccaagtcgaatgactgtcggaaagatgatagagcttctagggggtaaagctggg
gtttcatgtgggaggtttcactatggcagtgcttttggggagccaagcggtcatgcagac
acggttgaagctataagtcacacacttgtggagaaggggtttagctacaatggcaaggac
ttcatttattcaggtatcacaggttgcccactacaggcatatattttcatgggaccaatt
tactaccagaagctaaagcatatggtattggataaaatgcatgctcgtggtagtggtccc
cgagtcatgctaacaagacaaccaacagaggggagagctcgaaatggaggactacgagta
ggagaaatggaacgtgattgtctgatcgcgtatggtgctagtatgttgatatttgagcgt
ttgatgatatctagtgatccttttgaagttcaggtttgcagagcttgtgggttgttggga
tattacaaccataagttgaaaactggaatttgttcatcgtgcaaaaacggagataatatc
tcaacaatgaagcttccgtatgcttgcaagcttttaattcaggaactccaatcgatgaat
attgtccctcgattaaaactagcagaggcataa

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