Ziziphus jujuba (Chinese jujube): 107404490
Help
Entry
107404490 CDS
T04794
Name
(RefSeq) uncharacterized protein LOC107404490
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107404490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zju03009
]
107404490
Ribosome biogenesis [BR:
zju03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107404490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_C
SPOB_a
Motif
Other DBs
NCBI-GeneID:
107404490
NCBI-ProteinID:
XP_015866930
UniProt:
A0A6P3YSH8
LinkDB
All DBs
Position
10:join(5870539..5870955,5872403..5873029,5873198..5873647,5874263..5874435,5874626..5874809,5875005..5875094)
Genome browser
AA seq
646 aa
AA seq
DB search
MADVVQYRMERMVNEFDDLERRGLFTRREIAEIVKQRRKFEYRLKRPSPLKQDFLAYIDY
ETQLDKLRRLRKKSVARELKEKGINANKKKMKKSVSDYAGVSRIVEIYRLAVMRFKGDIE
LWFRYLEFCRERKNGRMKKVLAQVIRFHPKVPGIWLYAAAWEFDHNLNVAAARALMQSGL
RMCPTAEDLWVEYLRMELTYLNKLRARKVALGEDEGTLIRDKKADDGFVPFNDERENDDG
SNVESGDTKKRVDLFREQGFSVLKTIYAGAVEALPSSLTLRKRFLDILDATDLAHSEDMR
KEILSEMKRDFSTEPEYWDWLARLEYDPESIKEMSEELMLSQIQKAVQVYEEAIKVLPSA
VMYNLYVSFLRDIIASQKGEEGSLGLSSQCATSISHLLVVYEKAETMGCITEDLACQHIS
FYLQLGRLEEARKLAEKLCRERFSDSVKLWLLRVSVEIKHVTRNSPSPSKADLLPIFELL
KDVLTRASVSESESLWLMALKLFANQKSYFDKLVEISIGSLIKDGGIDDGFSLSSAIVNF
VLQKDGIQQAREMYKRFLALPRPGLAIYRNCIQLESNLASIGDKDGLVNARRLYESALAT
YSQNVSLWQDFHKMETKLGTSETASAVYWRARKILKDTAALLMPEL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtggtgcagtaccggatggagcgaatggtcaatgagttcgatgacctcgaa
cgccgtggcctattcactcgccgtgagatcgctgagattgtcaagcagcgccgcaagttc
gagtacagactcaagcgtccctctccactgaagcaggacttcttggcctacattgactac
gagactcagctcgacaagctccggcggctcaggaagaagtcggtagctcgcgagctcaag
gagaagggaatcaacgccaataagaagaagatgaagaagtctgtttctgactatgctggt
gtttccaggattgttgaaatttacaggcttgcggttatgcggtttaagggtgacattgaa
ttgtggtttcggtacctggaattttgtagagagcgaaagaatggcagaatgaagaaggtc
ttggcccaggttattaggtttcatccaaaggtcccaggtatttggctgtatgctgcagct
tgggaatttgaccacaacttaaatgttgcagctgcccgtgctctcatgcagagtgggttg
agaatgtgccctactgcagaagacctgtgggtagaatatcttcggatggaactcacatat
cttaataagttaagggccaggaaggttgctcttggagaagatgagggaactctgattcgt
gataaaaaggctgatgatggatttgtgccttttaatgatgaaagagaaaatgatgatgga
tcaaatgttgaaagtggggatacaaagaagagagtagacttgtttcgagagcagggattt
agtgttttaaaaaccatatatgctggggcagttgaagctcttccttctagtttgacactg
agaaagcgatttcttgacattttggatgctacagacttggcgcattcagaagatatgcgg
aaggaaatactaagtgagatgaagagagacttttcaacagaaccagaatattgggactgg
cttgcaagacttgaatatgatcctgaaagtataaaggaaatgagtgaagaactcatgctt
tctcaaatacaaaaagcagttcaggtatatgaggaggctataaaagttctgccttctgca
gtaatgtataatctgtatgtaagttttcttagggatattattgcatcccaaaaaggagaa
gaaggatctttgggtttatcaagccagtgtgcaacttctatatcacatctcttggtggta
tacgagaaggcagaaacaatggggtgcattactgaggatcttgcatgccagcatatttca
ttttatttgcagctgggaagactggaagaagccaggaaactagcagaaaagctttgccgt
gaaagattttcagattcagtaaagttatggttgttaagggtctcagtagaaattaaacat
gtaacaaggaattccccatctccgagcaaagctgatcttctacctatatttgaactccta
aaagatgttttgaccagagcctctgtatcagaatctgagagtttgtggctgatggcacta
aaattgtttgcaaatcaaaaaagttattttgacaaactggttgagatttctattggatca
ttaattaaagatggtggcattgatgatggattctccctctcttctgctattgtgaatttt
gttctacaaaaagatggaattcagcaggctagagagatgtacaaacgctttcttgcttta
ccacgtccagggcttgctatatacagaaactgtattcaattggaatccaatcttgcatca
attggtgataaagatggcctagtaaacgcgaggagattatatgaatctgcacttgcaact
tacagtcaaaatgtgagcttatggcaagatttccataaaatggagaccaagttagggaca
tcagaaacagctagtgcagtctattggcgtgcaaggaagattctaaaagacactgcagcg
cttctaatgccggagttgtaa
DBGET
integrated database retrieval system
