Ziziphus jujuba (Chinese jujube): 107404508
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Entry
107404508 CDS
T04794
Name
(RefSeq) RNA pseudouridine synthase 7
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zju03016
]
107404508
Enzymes [BR:
zju01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
107404508
Transfer RNA biogenesis [BR:
zju03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107404508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
107404508
NCBI-ProteinID:
XP_015866947
UniProt:
A0A6P3YSJ3
LinkDB
All DBs
Position
2:complement(join(8313409..8313511,8313985..8314223,8314534..8314659,8315170..8315226,8315468..8315533,8316221..8316303,8316471..8316549,8316764..8316851,8317179..8317279,8317478..8317555,8317647..8317690,8317793..8317883))
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AA seq
384 aa
AA seq
DB search
MKRKREEKNMEIVWQTPVNPPERQDYIFRNGRRHVRPYYFEFISHVKNRWAGKSIVDLFA
QEFKGRPYDYYVDAVKCGRIQVDGQMVPVSYIVKSSQKISHFLHRHEPPVMAWDVKILRK
EPDVLTVCKPASVPVHPCGQYRKNTIVGILQAEYGLAPLFPVHRLDRLVSGLLILARNAS
KADIFRQEIEAGKVHKQYVARVIGVFPEHEQVVNVNIDYNAREGRSTAEVGNSCGDTSIK
GKAACTKFTRISTDGIHSIVLCEPVTGRTHQIRVHLQYAGHPIANDMLYLSKHVTDRSTQ
GVSADKAAVCSGHSPSSGFDQNSSDANGGNSIEDFSIDPMCTNCPNLAPKGYDGHEEGLW
LHCVRYSGPGWIYECPYPEWATLS
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaagagagaagagaagaacatggaaattgtgtggcaaaccccagtgaaccca
ccagagcgtcaagattacatctttcgcaacgggaggcgccacgtaagaccgtactacttc
gagttcatctctcatgtgaagaatcggtgggctggaaagagcattgtggatttgtttgcc
caagagtttaaaggccgaccttatgattactatgttgatgctgtcaaatgtggaaggata
caagttgacggacaaatggtgccggtttcctatatagttaagtcatcacagaagataagc
cactttttgcacaggcatgaaccaccggtgatggcttgggatgtcaaaattctccggaaa
gagccggatgtgctgactgtttgtaaacctgcttctgttccggtgcatccatgtggtcag
tatcgtaagaacaccattgttggcatccttcaggcggagtatggcttagcacctttattc
cctgttcatcggttagatcgtctagtctcaggactccttatcttggccagaaatgcttca
aaagctgatatttttaggcaagagattgaggcagggaaggtgcacaaacagtatgttgca
agagtcattggggtttttcctgaacatgagcaagttgtaaatgttaacatagattataat
gctcgagaaggaaggagcacagcagaggttggcaattcttgtggtgatacttccataaag
gggaaggctgcttgtaccaagttcactagaattagtaccgatggtatccatagcattgtc
ttgtgcgagccagtcactggccgaacacaccaaatacgtgtccatttgcaatatgcaggc
catccaatagccaatgacatgctttacctatccaaacatgtaactgatcgttccactcaa
ggagtgagcgctgataaagctgctgtgtgttcaggccattctccgtcatctggttttgat
caaaattcttccgatgcaaatggaggaaattccattgaagatttcagcattgatcccatg
tgtacaaactgtccaaatttagctccaaaagggtatgatggtcatgaagagggcctgtgg
ctccattgtgttcgatattctggaccaggatggatttatgaatgcccatatccagaatgg
gcaacgcttagctag
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