KEGG   Ziziphus jujuba (Chinese jujube): 107404734
Entry
107404734         CDS       T04794                                 
Name
(RefSeq) uncharacterized protein LOC107404734
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:zju03009]
    107404734
   04121 Ubiquitin system [BR:zju04121]
    107404734
Ribosome biogenesis [BR:zju03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    107404734
Ubiquitin system [BR:zju04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107404734
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz Sof1 WD40_Prp19 WDR55 Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 WDR90_beta-prop_4th ANAPC4_WD40 NBCH_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_1st WD40_RFWD3 eIF2A Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_IP5PC_F PROPPIN Beta-prop_Vps41 VID27
Other DBs
NCBI-GeneID: 107404734
NCBI-ProteinID: XP_015867212
UniProt: A0A6P3YXQ5
LinkDB
Position
8:join(5542258..5542323,5542424..5542513,5542653..5542764,5543231..5543258,5543761..5543859,5544004..5544073,5544159..5544193,5544307..5544381,5544467..5544562,5545020..5545083,5545228..5545281,5545713..5545798,5545920..5545980,5546061..5546125,5546360..5546465,5546766..5546854,5546985..5547147)
AA seq 452 aa
MKVKVISRSTEDFTRERSGDLQRVFRNYDPNIRTQEKAVEYVRALNAAKLEKIFARPFIG
AMDGHVDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIASRKTVCQFPGHRGAVRGLAASTD
GRILVSCGTDCIVRLWNVPVSSLTESYDSSDKSIEPLGEYVWKNAFWAVDHQWDGDRFAT
AGAGVHIWNHNKSAPERSFEWGTDTVISVRFNPGEPNVLATTATDRSITLYDLRMSSEVT
KLIMRTRNNSISWNPMEPINFTAANEDCNCYSYDARKMDEAKCVHKDHVSAVMDIDYSPT
GREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK
AKASEQLGVLLPREQKRHEYHEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTMTEA
QRRKEERRKKHSAPGSTTTEPLRKRRILKVVE
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgaaggtcaaagtaatctctcgctccaccgaagactttactcgagaacgaagtggagat
ttacagagggtgttccgtaattacgaccccaacatccggacccaagagaaagccgtcgag
tatgtcagggctctaaacgctgccaaattggagaagatttttgcaaggccgtttattgga
gctatggatgggcatgtagatgctgtttcctgcatggcaaagaatccgaaccacttaaaa
ggaatattttcgggttcaatggatggagatattcgtctatgggacatagcttccaggaag
acagtttgtcaatttcctggtcaccgaggtgctgtccgaggtctagcagcatctacagat
ggacgcatccttgtttcttgtggaactgattgcattgtaaggctctggaatgtacctgtt
tcttccctcacggaatcatatgattcatctgataaatctattgagccactgggggaatat
gtttggaagaatgcattttgggctgttgatcaccagtgggatggtgatcgttttgccaca
gctggagctggagtgcatatatggaatcataataagtctgctccagaaaggagttttgaa
tggggaacagacacagttatctctgtacggttcaatcctggagagccaaatgtcttggcc
acaacagcaaccgaccgcagcataaccctgtatgatttgcgaatgtcatcagaagtaaca
aagcttataatgaggacaagaaacaattccatttcgtggaacccgatggagcctataaac
ttcactgctgctaatgaggactgcaactgctatagttatgatgctagaaagatggatgaa
gctaagtgtgtgcataaggatcatgtttctgcagtgatggatattgattattcaccaact
ggtcgtgaatttgtgactgggtcttatgatagaactgtaagaattttccagtataatgga
ggtcatagccgagaaatttatcatacaaagagaatgcaaagggtattttgtgtcaagttc
agctgtgatgcaagctatgttatttctgggagcgacgacactaaccttagactttggaag
gccaaagcatcagaacaattgggagttcttcttccaagagaacagaagagacatgagtat
catgaagctgttaagaatcggtacaagcaccttcctgaagtcaagcgcattgtcaggcat
aggcatctaccaaaaccaatattcaaggcagctgctctcagacgaaccatgactgaagct
cagagaagaaaagaagaaaggaggaaaaaacacagcgccccaggtagtactactactgag
ccactacgtaaaaggagaatcctaaaagtagttgagtga

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