Ziziphus jujuba (Chinese jujube): 107405144
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Entry
107405144 CDS
T04794
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
107405144
03036 Chromosome and associated proteins [BR:
zju03036
]
107405144
Enzymes [BR:
zju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
107405144
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107405144
Chromosome and associated proteins [BR:
zju03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
107405144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Motif
Other DBs
NCBI-GeneID:
107405144
NCBI-ProteinID:
XP_015867642
UniProt:
A0A6P3YV13
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All DBs
Position
3:complement(join(1659027..1659974,1660425..1660649,1661198..1661935))
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AA seq
636 aa
AA seq
DB search
MSFIRDFLQWLIGSDQSSSPRPPRSSTSQSQTWQPSPRTSSSPSFSFLEVPQTSSTHKPS
PSPIYPSASSSQNQLPSFSTYKPSLSSQNQIPSTHKPPPSPIYPSASSSQNQLPSFSTYK
PSPSSQNQSPSTHKPPPSPIYPSASSSQNQLPTSSTHKPSTSSQNPLPNFKPTLREAPKN
ATNQEGKANYIWVEDDASLPLYIIPEDKKDLIKKDIVPQVLKMPLSPLTYKDYFAALLYA
EDYYYEKWSEFEMTNVTLELQKAEISNRHNQHNKHLNGTDEKDEKIFVQFNMDALPGNRP
FLLSRDLVFAKPSDSNVEPFKGVIFRLVRSRIVLVEFEDGFYLQHHSAREYDISFSFNRI
CLKRAHQALNAVSDNLLWNFLFPDSASETTIPTAPASSSHFHECNSDVPSIVSQILSIKG
SPPYLVSGPLCVPERKVFSHSNNLSKTGLLVFEAIVQIYKSSPECRILLSAPSNSACDVL
MRSLMKVIPESNMFRVNAAFRGKDEVPDDILSSCLYKEECFACPSLEKLLKFKVIFSTFM
SSYRLHSEGIAAGHFSHIFLVDASFAIEPEALVTLANFADKNTAVVVTGKPGNSSSWVRS
EIGRKKGLKISYFERLCECRPYRTPNPKFFADLGLS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcattcgtgatttcttgcaatggcttattggtagtgaccaaagttcttcacct
agaccacctcgatcaagtacatcccaaagccaaacatggcagcctagtcccagaacttct
tcttcaccatcgttttccttcttggaggtaccacaaacttcaagtactcataaaccatct
ccatctccaatatatccatctgcgtcttcttcccaaaatcagcttccaagcttttcaact
tacaaaccatctctttcttcccagaaccaaattccatctactcataaaccacctccatct
cctatatatccatctgcgtcttcttcccaaaatcagcttccaagcttttcaacttataaa
ccatctccttcttcccagaaccaaagtccatctactcataaaccacctccatctcctata
tatccatctgcttcttcttcccaaaatcagcttccaacatcttcaactcataaaccatct
acttcttcccaaaacccgcttccaaactttaagcctacccttcgtgaagctcccaaaaat
gcaacaaatcaggagggaaaggcaaactatatatgggttgaagatgatgcttctttgcct
ctatacatcattcctgaggataaaaaagatttgatcaagaaagacattgttcctcaggtt
ctgaaaatgcctttgtctcctttgacctataaggactactttgctgctttgctctatgct
gaagactactactatgagaaatggagcgagttcgaaatgacaaatgtgacattggagttg
caaaaagctgaaatttctaacaggcataaccagcataataaacatttgaatggtactgat
gagaaagatgaaaaaatctttgtccagtttaatatggatgcgcttcctgggaaccgccca
ttccttttgtcaagggacttagtctttgcaaaaccttctgatagcaatgttgagccattt
aagggtgttatctttcgtctagtgcgcagccgcattgtactagtggagttcgaagatggt
ttctatttgcagcatcattcagcccgggaatatgatatcagcttttcattcaacaggata
tgcttgaaaagagcacaccaagcacttaatgctgtatcagacaatctattgtggaatttc
ctatttcctgattctgcatctgagacaacaattcccactgctccagcttcaagttctcac
tttcacgagtgcaattcagatgtaccttccatagttagtcagattctaagcattaagggc
tcaccaccttaccttgtatctggtccattatgtgtacctgaaagaaaagtattttcacac
tcgaataatctatcgaaaactggtttgcttgtttttgaagcaatagtgcaaatatataaa
tcatcaccagagtgtcgaattcttttaagtgcaccaagtaacagtgcttgtgatgtgctg
atgagaagcttgatgaaggtgattccagaatccaatatgttccgagtaaatgctgcattt
cgcgggaaagatgaggtgccggacgacatcctctcctcatgtctttacaaagaagagtgt
ttcgcttgtccatcacttgagaaacttctaaagttcaaggtgattttctccacttttatg
agtagttaccggttgcatagtgaaggcattgctgcaggacattttagtcacatttttcta
gtggatgcttcatttgccattgagccggaggcattggtgaccctagctaattttgctgac
aaaaatactgctgttgttgtcactggtaaacctggaaattcttcgagttgggttcgttcc
gagattggtaggaaaaaggggttgaagatttcgtattttgaaagactatgcgaatgcagg
ccatacagaactcccaatcctaagttctttgcggatttaggcttatcatga
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