Ziziphus jujuba (Chinese jujube): 107405888
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Entry
107405888 CDS
T04794
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107405888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
107405888
04121 Ubiquitin system [BR:
zju04121
]
107405888
03036 Chromosome and associated proteins [BR:
zju03036
]
107405888
03400 DNA repair and recombination proteins [BR:
zju03400
]
107405888
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
107405888
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
107405888
Chromosome and associated proteins [BR:
zju03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
107405888
DNA repair and recombination proteins [BR:
zju03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
107405888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-C3HC4_2
zf-HC5HC2H
BRCT_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
zf-HC5HC2H_2
zf-RING_5
zf-rbx1
zf-RING_10
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
107405888
NCBI-ProteinID:
XP_015868465
UniProt:
A0A6P3YWW7
LinkDB
All DBs
Position
1:complement(join(575283..575633,576146..576264,576420..576585,576689..576815,576919..577016,577102..577288,577870..577970,578088..579086,579174..579275,579700..580190,580678..580791,581021..581091,581172..581225,581428..581483))
Genome browser
AA seq
1011 aa
AA seq
DB search
MGDLNHLERMGRELKCPICLSLLNSAVSLNCNHVFCNHCIVKSMKSDSNCPVCKVPYRRR
EVRSAPHMDSLVNVYKSMEIASGINIFVTQHAPSSKFSDGEQQPDEYNNHHGQNSGGIFL
ERVEEQKTSQRNGSREICNSNQNCLGSLNVKPSFPTKKRVQVPQCPPSETTIQHIHCEGE
LGETMVNLSKKGSAVQKEKPNINEKGEPVLSPFFWLREEETVESLSQHTDVDQLVDIPLP
NVPSFSDIRDSDDENSDRVSPQEKSTSAADLLDGEMFEWTQRACSPELCSSPFKMQIDDT
EIDGVNEKELKEASKDKKTGKEVLTDNAICPKSKPDNGNTNVLPEISIPGRKNANNQVGN
SNDKRGRKVRETTGKTNPINGRNPDNGSQGSSLKLSKRCKRSKKSHPQTIAAKRTNKKAV
SFTIQTETLDHRDENMVSELPSSLGKKENTNQDITLKKNGKNCKKIHVQNKIQRSRKQNM
DSLVSMKNVVEEVSKIQNQKNEGVVPHLPVLSIPTAHNDKTVNFRDKPSNLSRKFESSDE
EPRSKKKFRVSSVGNSKNDMANETHLNNHHTKETLATENIQDSHDAMALPDLALVKKLPS
LTNDMILQRCETTPSETQCAFCLSSEESEATGEIVHYYNGMPVAANHHGGSKVIHSHKNC
TEWAPNVYFKDDIAKNLEVELTRSRRIKCCCCGIKGAALGCFEKSCRKSFHVPCAKLIPQ
CRWDTDNFVMLCPLHASSKLPSEYSQSQAMKKKCNAKKLSYVQHDTVSMKHDLGTSTSWS
PCRSSKKLVLCCSALTDLERESVSRFEKFSGVTVLKRWDSSVTHVIASTDENGACRRTLK
VLMGILEGKWILSMKWIKACMEAMQPVDEENYEITTDTHGIRDGPRLGRLRVMNKQPKLF
HGFKFYFMGEFLSSYKGYLQDLLTAAGGIILHRKPVSLDQDAFSSVFPTYQTFIIYSLEE
PEKCDPSKKDVIFNRRRVNAEALASSTGAKAASNLCILNSIAACKLPIFTE
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgggggatctgaatcacctggaaagaatgggcagggaactcaagtgccccatctgtttg
agtctgctgaattccgcagtctcgctgaactgcaatcatgtattctgcaaccattgtatt
gtgaaatccatgaaatcagactccaactgtcctgtttgtaaggtgccatatcgtcgtaga
gaggtccggtctgctcctcatatggatagcttggtaaacgtttacaaaagcatggaaatt
gcttcaggaatcaatatatttgtcactcagcatgcaccctcaagtaaattttcagatgga
gaacaacaaccagacgaatataacaatcaccatggacaaaattctggtggaatttttttg
gaaagagtagaggaacaaaaaacttcccaaagaaatgggtcaagagaaatatgtaattcc
aaccaaaactgtcttggatcacttaatgttaaaccttcgtttccaaccaagaaaagggtt
caggtgccacaatgccctccttcagaaactacgatacaacacatacattgtgaaggtgaa
ttaggtgaaactatggttaatttatccaaaaaaggttcagcggttcagaaggaaaagcct
aatataaatgagaaaggagaaccagttctttctccttttttttggttaagggaagaagaa
actgtagaaagtctaagtcagcatactgatgttgatcaactagtggacataccacttcca
aatgttccttcattcagtgacatcagggactcagatgatgaaaactctgatagagtgagc
ccacaagaaaaatccactagtgctgcagatcttttggatggtgagatgtttgaatggaca
caaagagcttgttctcctgagctatgttcaagtccctttaagatgcagattgatgatact
gaaattgatggagttaatgagaaagaactcaaagaggcttcaaaagacaagaaaacaggc
aaagaggtgcttactgacaatgcaatatgcccgaaatccaaacctgataatgggaatact
aatgtgctgccagaaatttccatccctggaaggaagaatgctaataatcaagtgggtaat
agtaatgataagagaggtcgaaaggttagggaaacaactggcaaaacaaatcctataaat
ggcagaaatccagataatggatctcaaggaagctctttaaaattgtccaaacgctgcaaa
aggagtaagaagtctcatcctcaaaccattgctgctaagcggacaaataaaaaagctgtt
tcattcactatccaaactgaaactttagaccatcgtgatgaaaacatggtgagtgaatta
ccttcttcattaggaaagaaggaaaacaccaatcaagatatcaccctgaagaagaatggg
aaaaattgtaagaagatccatgtccagaacaaaattcagagatcgaggaaacaaaatatg
gattcattggtatctatgaaaaatgtggttgaagaagtttctaagatacaaaaccaaaag
aatgagggagttgtgcctcatttgcccgttttatctatccctacagctcataatgataag
accgtcaattttagggacaagcccagcaacctttctagaaaatttgaatcaagtgatgaa
gaaccaaggagtaagaaaaagttcagagtttcatctgttggaaactccaagaatgatatg
gctaatgagactcacctcaacaatcatcatacaaaggaaactcttgccactgaaaacatt
caagatagccatgatgcaatggctctgcctgatttagcattagtgaagaaactaccttct
ctgacaaatgacatgattttgcagagatgcgagaccactcctagtgaaacccaatgtgcc
ttttgcctttcatcagaagagtcagaggctacaggagagatagttcactattacaatggc
atgcctgttgctgcaaatcaccatggagggtctaaggttatacattcacacaaaaactgt
actgaatgggcacctaatgtttactttaaagatgatattgctaagaatcttgaagttgaa
ttaactagaagtcgaagaattaaatgttgttgctgtggaattaagggtgcagctcttggg
tgttttgagaagagttgtcgaaagagctttcatgttccttgtgcaaagttgatccctcaa
tgtcgatgggatactgataactttgttatgttatgtcctcttcacgcatcttctaagttg
ccaagtgaatattctcaatctcaagcaatgaagaaaaaatgcaatgctaagaagctatca
tatgttcagcatgatacagtttctatgaaacatgaccttggcacctcaaccagttggagt
ccttgtcggtcatctaagaaattggttctctgttgttcagctctcacagatttggagagg
gagtctgtttctcgttttgagaaattttctggagttacagtccttaagaggtgggactca
agtgtcacgcacgttattgcatcaacagatgaaaatggagcatgtagaagaaccctcaaa
gttttgatgggtatcttggaggggaagtggatattgagtatgaagtggattaaggcttgc
atggaagccatgcaaccagttgatgaagaaaactatgaaattaccactgatactcatgga
atcagggatggtcctcgccttgggagactgagagtaatgaacaagcaaccaaagctattt
catgggtttaagttctactttatgggagagtttctatcatcgtacaaggggtatctacaa
gaccttctaactgctgcaggaggaattattctgcatagaaaacctgtttcgcttgaccag
gatgccttttcatctgtttttcctacttatcaaaccttcataatttacagccttgaggaa
cctgaaaaatgtgatccgagtaagaaggatgtgattttcaatcgtagacgggttaatgca
gaggctctggcaagttcaactggagcaaaagcagcaagcaatttatgcattttgaactcc
atagctgcttgcaagttacctattttcactgaataa
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integrated database retrieval system
