Entry |
|
Name |
(RefSeq) tyrosine--tRNA ligase 1, cytoplasmic
|
KO |
|
Organism |
zju Ziziphus jujuba (Chinese jujube)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:zju00001]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107405976
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:zju01007]
107405976
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:zju03016]
107405976
03029 Mitochondrial biogenesis [BR:zju03029]
107405976
Enzymes [BR:zju01000]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
107405976
Amino acid related enzymes [BR:zju01007]
Aminoacyl-tRNA synthetase
Class I (A)
107405976
Transfer RNA biogenesis [BR:zju03016]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
107405976
Prokaryotic type
107405976
Mitochondrial biogenesis [BR:zju03029]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
107405976
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
6:join(27630381..27630490,27630614..27630761,27631214..27631503,27631584..27631680,27632505..27632610,27632726..27632808,27632908..27633053,27633220..27633325,27633511..27633570,27633670..27633690)
|
AA seq |
388 aa
MATEAPDQTPTEAVESLSISNSQTEEEPSSSSNRSNLMSLEEKYQIVRSIGEECIQEDEL
LNLLEKKPEPVCYDGFEPSGRMHIAQGVLKAINVNKLTSAGCRVKIWIADWFAQLNNKMG
GDLKKIEVVGRYFIEIWKAAGMDLEGGKVEFLWSSKEINSRAHEYWPLVMDIARRNKLPR
IMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIK
RKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIFMEDDEAEVNLKIKKAYCPPKVVEGNPC
LEYIKHLVLPWFKQFVVERSADNGGDKTFRSFEELIADYESGELHPADLKPALSKALNKI
LGPVREHFRTDSNAKDLLKRVKAFRVTK |
NT seq |
1167 nt +upstreamnt +downstreamnt
atggcgacggaagcaccagatcagaccccaaccgaagcagtggaatcgctgtccatttcc
aattcacagacggaagaggaaccttcgagctcctctaatcgatcaaatctaatgagtttg
gaggagaaataccagattgtgaggagcataggagaggagtgcatccaagaggatgagctt
ctgaatcttctggagaaaaagcctgagcccgtctgctacgatggattcgaaccctctggt
cgaatgcacatcgctcagggagttttgaaggccataaatgtaaataagttgacatctgcc
gggtgcagagtgaaaatatggattgcagattggtttgctcagctgaacaataaaatggga
ggtgacctaaagaaaattgaagttgtgggccgctacttcattgagatttggaaagctgct
gggatggacctagaagggggcaaagttgagtttttatggtcgtcaaaggagatcaattca
agagcacatgagtactggccccttgtaatggatatagctcgtaggaataaacttccgagg
ataatgagatgctgtcaaattatgggacgaagtgagcaagatgagctgactgcagcccaa
attctctacccatgcatgcaatgtgctgatatattcttcctgaaggcggacatctgccaa
ttaggaatggaccagcggaaagttaatgtacttgcaagagagtattgtgatgacattaag
aggaagaacaagcctattatcctgtctcaccacatgttacctggtttgcaacaagggcag
gagaagatgtccaaaagtgatccttcgtcctccatttttatggaagatgatgaggccgaa
gtgaatttgaagattaagaaagcttactgccctccgaaggttgtggaagggaatccatgc
ttggagtacataaagcaccttgttctaccttggtttaaacaatttgttgtagagcgcagt
gcagataacggtggagataagaccttcagaagctttgaagaattgattgctgactatgaa
agtggggagctacatccagctgacctcaaaccggctttatcgaaggctttgaataaaata
ctggggcctgtgcgggaacacttcagaacagacagcaatgcgaaagatcttttaaaaagg
gtcaaggctttcagagtcaccaagtga |