Ziziphus jujuba (Chinese jujube): 107406346
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Entry
107406346 CDS
T04794
Name
(RefSeq) KH domain-containing protein At1g09660/At1g09670
KO
K14945
protein quaking
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zju03041
]
107406346
Spliceosome [BR:
zju03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107406346
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
107406346
NCBI-ProteinID:
XP_048324340
LinkDB
All DBs
Position
10:complement(join(28890054..28890212,28890293..28890436,28892480..28892596,28892728..28892862,28894226..28894365,28895566..28895651,28896818..28896936))
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AA seq
299 aa
AA seq
DB search
MSSVMGERIPHGSYFQYPPPPPGVHASPHRSSSIPVDRERYLSELLAERQKLGPFVQVLP
LCSRLINQEIRRVSGFNHTFMDHERLEHESPFRSLSQHPTGRPMDLEGWPSMQMEENGLH
QRMAPLQSPSIGWPGVQGAPTTPIVKRVVRLDVPVDKYPNYNFVGRILGPRGNSLKRVEA
MTECRVYIRGRGSVKDSVKEEKLKDKPGYEHLNEQLHVLVEAEFPEDIINSRVDHAVAIL
ENLLKPVDESLDHYKKQQLRELAMLNGTLREESPSMSPSMSPSMSPFNSTGMKRAKTGR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgtgatgggagagagaatcccgcatggaagttacttccagtaccctccacct
cctcctggagtccatgcttctccacataggtcttcttctatccctgtagatcgagaaaga
tatttgtctgaattactggcagaaaggcaaaagttgggaccatttgttcaagttctacct
ctatgtagcagacttataaatcaagaaattagacgggtatcaggcttcaatcacactttt
atggatcatgaaagacttgagcatgagagtccgtttcgatcattaagtcaacatccaacc
ggtagaccaatggatttggagggatggccttcaatgcaaatggaggaaaatggacttcac
caaagaatggccccattgcaatccccttcaattggttggcctggggtccaaggagctcca
accactcctattgtaaagagagttgttagacttgatgttcctgtggacaaatatccaaat
tataactttgtcggccgaattttgggaccacgggggaattccttgaaaagagttgaagcc
atgacagaatgcagagtgtacataagaggtcgggggtctgtgaaagattctgtgaaggaa
gaaaaattgaaagataaacctggatacgaacaccttaatgaacagctgcacgtgttggtg
gaggctgaatttccggaggatataataaattcacgcgtggatcatgcagtggcaatacta
gaaaaccttttgaagcctgtggacgaatccctggatcattataaaaagcaacaacttagg
gaattggcaatgctaaatggtacattgagagaagaaagcccaagtatgagccccagcatg
agccccagtatgtctccctttaacagtacaggaatgaaaagagccaagacgggaagatag
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