KEGG   Ziziphus jujuba (Chinese jujube): 107406585
Entry
107406585         CDS       T04794                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 8A
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03020  RNA polymerase
zju03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107406585
  09124 Replication and repair
   03420 Nucleotide excision repair
    107406585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zju03021]
    107406585
   03400 DNA repair and recombination proteins [BR:zju03400]
    107406585
Transcription machinery [BR:zju03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     107406585
  RNA polymerase III system
   RNA polymerase III
     107406585
  RNA polymerase I system
   RNA polymerase I
     107406585
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107406585
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 107406585
NCBI-ProteinID: XP_015869217
UniProt: A0A6P3Z2S8
LinkDB
Position
1:join(47193946..47194018,47194121..47194278,47196543..47196634,47196965..47197076)
AA seq 144 aa
MAEFLFEDIFKIERLNPDGKKFDKVTRIEAKSEKFDMFMHLDINTEIYPMKEREKFSMAL
SSTLNEDGTPDTGYYTQANRKTLADNYEYVMQGKLYRISEGPGHGGRAEIDASFGGLLMM
LKGDPSHFKKYELDQRLFLLIRKV
NT seq 435 nt   +upstreamnt  +downstreamnt
atggcggagtttctcttcgaagatattttcaagattgagcggctgaacccagatgggaaa
aagtttgataaagttactcgaattgaagcaaagagtgagaagtttgacatgttcatgcac
ctggatattaacacagagatatacccaatgaaggaacgtgaaaaattctcaatggcactc
agttctactcttaatgaggatggaactcctgacactggatattacactcaggccaatcgg
aagactcttgctgacaactatgaatatgtcatgcaagggaagttatatagaatttcagaa
ggtcctggacatggtggaagagcagagatagatgcttcattcggtgggcttttgatgatg
ctgaagggtgatccatcacatttcaagaagtatgaacttgaccagaggctatttctgctg
ataaggaaggtgtag

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