KEGG   Ziziphus jujuba (Chinese jujube): 107406683
Entry
107406683         CDS       T04794                                 
Name
(RefSeq) DNA-repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    107406683
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zju03400]
    107406683
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     107406683
SSDB
Motif
Pfam: BRCT BRCT_2 PTCB-BRCT RTT107_BRCT_5
Other DBs
NCBI-GeneID: 107406683
NCBI-ProteinID: XP_015869343
UniProt: A0A6P3YXL7
LinkDB
Position
1:join(45376465..45376737,45376843..45377031,45377616..45377727,45377922..45378001,45378136..45378249,45378688..45378774,45379050..45379403)
AA seq 402 aa
MSCSKKSPGNSGKNAGKRNLPSWMSCQGNENESCGKKQAGASQGEESNGGGNTKQAKGHS
KQCTGSGSTSAKENSKTSASSSAATNFSKLLEGVVFVLSGFVNPERSILRSQALEMGAEF
QPDWNSGCTLLICAFPNTPKFRQVEADCGTIVSKEWISECYSQRKLIDIESYLMHAGKPW
RRSDSSCKTNLDPKASPPRKSQKQDRSYSKPITSGVAELNKAPNAAKQYFSPSEVKKWAI
DDFNNTISWLESQEEKPEPSEIKKIAAEGILTCLQDAIESLEQKQDVCKLTEEWKFVPRV
VEELAKLDGVRDNNTGSMSKKNLRRHAMECKRIYEVELSSLEDTSLRKNKRQPKGDEQKK
DGKRIKSAGGGTAGYDSDETVEMTEEEIDLAYNTISSKIHKY
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgtcttgttcaaagaagagtcctggaaattctggtaagaatgctgggaagcgaaatctt
ccttcatggatgagttgtcaagggaatgaaaatgagtcttgtggaaagaaacaagctggt
gcttctcaaggtgaggaaagtaatggtggtgggaatactaagcaagccaaagggcatagt
aagcaatgtaccgggtccggaagtacatctgccaaggagaatagcaagacttctgcatcc
agttcggcagctacaaacttttccaagcttctggaaggggtagtatttgtactgtcaggt
tttgttaatcctgagcgtagcattttgagatcacaagctctggaaatgggagcagaattt
cagcctgactggaattccggatgcacgctgttgatttgtgcatttcctaacaccccaaag
tttcgacaagttgaggcagattgtgggactattgtttcaaaggaatggatatcagagtgt
tattcacagaggaagctcattgatattgaaagctacctgatgcatgctgggaaaccctgg
cgtagaagtgacagttcctgtaaaaccaacctagatccaaaagcatccccacctagaaaa
tctcaaaagcaagatagatcatattcaaaaccaattacctcaggagttgcagagttgaat
aaagctcctaatgctgcaaaacagtacttttctccttctgaagtgaagaagtgggccatt
gacgattttaacaatacaatctcatggcttgagagtcaagaagaaaagccagagccaagt
gagataaagaaaatagcggctgaagggattttgacttgtttacaagatgcaatcgagtct
cttgaacaaaagcaggatgtctgcaaactaaccgaggagtggaaattcgtgcctcgtgtg
gttgaggagctggcaaagcttgatggtgtgagagataataatacaggatcaatgtctaag
aaaaatcttcgtagacatgctatggaatgcaaacgaatttatgaggtggaacttagtagt
ttagaagacacttcattaaggaagaacaaaaggcagccaaagggtgatgaacagaagaaa
gatggcaaaagaattaaaagtgctggcggtggtacagcaggatatgacagtgatgaaact
gtggaaatgacagaagaggaaattgaccttgcatacaataccatatcttctaagatccat
aaatactga

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