KEGG   Ziziphus jujuba (Chinese jujube): 107406705
Entry
107406705         CDS       T04794                                 
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X1
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zju03021]
    107406705
   03036 Chromosome and associated proteins [BR:zju03036]
    107406705
Transcription machinery [BR:zju03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     107406705
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     107406705
    SLIK complex
     107406705
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HTH_CHD1_Hrp3 Chromo CHD1-like_C HDA2-3 ResIII DEAD NFACT-C Chromo_MIT1 SWI2_SNF2
Other DBs
NCBI-GeneID: 107406705
NCBI-ProteinID: XP_048325152
UniProt: A0ABM3IBS1
LinkDB
Position
10:complement(join(6741034..6741512,6741694..6741787,6741894..6742247,6742452..6742633,6742715..6742892,6743058..6743213,6744422..6744658,6744825..6744905,6745164..6745346,6745576..6745662,6745860..6745970,6746097..6746339,6747469..6747681,6749142..6749205,6749301..6749425,6749549..6749642,6750396..6750463,6750560..6750748,6751780..6751914,6752014..6752101,6752207..6752300,6752870..6752933,6754265..6754316,6755082..6755185,6755342..6755401,6755650..6755733,6755857..6756081,6758224..6758661,6759886..6759953,6760167..6760887))
AA seq 1756 aa
MAFFRNYSNETVSRSVLEEKGQGQSVDRIHNSVGNEDVDFTSSEKEFDMNMDVQDQSEGE
PDYANRLHNEVAANDSNGVGVSNFQPSGRRTAMAGKWGSTFWKDCQPMHTRGGSDSGQDS
DYRNVVGSEYNSSDGRGERLDSEDDDGAKDAGKGQRGHSDVPADEMLSDEYYEQDGEEQS
DLMHYSGFHNPVGSNSRPQSKPAAVNIVRTSRVLNDNEDSDGGDDDDNNDDADYEEEDGD
EDDPDDADFEPDFGVTSGRSANKDKDWDVEDSEEDDASIDAQELSDEDDSYYAKKPKVSR
RGKGGNNFKSIKERKFYYGTGRSRRGKPSFEDDESSAEDSESDSNEGFKSSRRKGAQVRK
SNGRSSLSTNVTGRNNEVRTSTRSVRKVSYVESEESEEVEETKKKKSQKEEIEEEDGDCI
EKVLWHQPKGMAEDALRNNRSTEPVLLSHLFDSEPDWSEMEFLIKWKGQSHLHCQWKSFS
ELQNLSGFKKVINYTKKVVEDIKYRKAISREEIEVNDVSKEMDLDLIKQNSQVERIIADR
ISKDSSDDVIPEYLVKWQGLSYAEATWEKDVDITFAQDAIDEYKAREAAMAIQGKTVDPQ
RKKSKGSLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVS
MLGFLQNTQQIHGPFLIVVPLSTLSNWSKEIRKWLPDMNVIVYVGTRASREVCQQYEFYN
KKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLLEFSTKN
KLLITGTPLQNSVEELWALLHFLDSDKFKSKDEFVQNYKNLSSFNEIELANLHMELRPHI
LRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVE
LKKCCNHPFLFESADHGYGGDSSINNASKMERIILSSGKLVILDKLLCRLHETKHRVLIF
SQMVRMLDILAEYMSLRGFKFQRLDGSTKAELRHQAMDHFNAPNSDDFCFLLSTRAGGLG
INLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKM
VLDHLVIQKLNAEGRLEKKEAKKGSYFDKNELSAILRFGAEELFKEEKNDEESKKRLLSM
DIDEILERAEKVEEKEADGEQGHELLSAFKVANFGSAEDDGSFWSRWIKPEAVAQAEDAL
APRAARNTKSYAEAAQPERSSKRKKKESEPQERVPKRRKADYSVASAPMIEGTSSQVRRW
SSGNLSKRDALRFSRAVLKFGNESQIGLIAEEVGGAVGAAPLDAQIELFNALIDGCRDAV
EVGSLDQKGPMLDFFGVPVKASDLLTRVQELQLLAKRISRYEDPIAQFRVLTYLKPSNWS
KGCGWNQVDDARLLLGIYYHGFGNWEKIRLDERLGLSKKIAPVELQHHETFLPRAPNLRD
RANALLEMELAVLGGKNASAKVGRKTSKKEKENLLNVSMTPGRVKKGKASSSMVNAQMNR
DRPPKPQRVEPLVKEEGEMSDNEEVYEKFKEEKWMEWCEDVMVDEIKTLGRLQRLQTTSA
NLPKEKVLSKIRNYLQLLGRRIDQIVLEHEEEPYRQDRMTMRLWNYVSTFSNLSGERLHQ
IYSKLKQERDEEPGPSHANGDANHFTPFSRNVERQRGFRNMTTYQGSEPFQHGHDSAKFE
AWKRRRRAETDNQFTVQSTSQRPPLSNGIPLSDPSSLGILGAAPAPFENRRIGNERPYKM
RQTGAPPRQGFSSGVK
NT seq 5271 nt   +upstreamnt  +downstreamnt
atggccttttttaggaactattctaatgaaacagtttcacgtagtgtattggaagaaaaa
ggccagggacagagtgtagatagaattcataattcagtgggaaatgaggatgtagatttc
acttcaagtgagaaggaatttgatatgaacatggatgtgcaggatcagagtgaaggtgaa
ccagattatgctaatagattgcacaatgaggtagctgctaatgacagcaatggagtagga
gtatcaaattttcaaccttctgggagaagaactgcaatggctggaaaatggggttcaact
ttttggaaggactgtcaacctatgcacactcgtggtgggtctgattctggacaggattct
gattatagaaatgtggttggatcagagtataattcttctgatggcagaggagaaaggtta
gactccgaagatgatgatggggcaaaagatgcaggaaagggccaacgtggccattctgat
gtccctgcagatgagatgttgtctgatgaatattatgagcaggatggagaagagcagagt
gacttgatgcattatagtgggtttcacaatcctgttggttcaaattctaggccacaatct
aagcctgctgcagttaatattgttaggacttccagagttttgaatgataatgaagattcc
gatggtggtgatgacgacgacaacaatgatgatgctgattacgaagaagaggatggagat
gaagatgaccctgatgatgcagactttgaacctgattttggtgtcacaagtggtcgctct
gcaaacaaggataaagattgggatgttgaagattcggaagaagatgatgcaagtattgat
gcgcaggaactgtctgatgaggatgattcttattatgcgaagaaacctaaagttagtcga
cggggtaaaggtggaaacaattttaaatctattaaagaacgtaaattttattatggaact
ggtcggtcaagaagagggaaaccgtcgtttgaagatgatgagtcctcagcggaggactct
gaaagtgacagtaatgagggtttcaaaagctcgagaaggaaaggggcacaggtccgtaaa
agcaatggtcggtccagtttatcaacaaatgtcactggacgaaacaatgaggtacgcact
tctactaggtctgtccggaaggtatcatatgttgaaagtgaagaaagtgaggaggttgaa
gaaaccaagaagaagaagtcccaaaaggaggaaattgaagaggaggatggcgattgtatt
gaaaaggtgctgtggcatcagccaaagggcatggcagaagatgctcttaggaataacagg
tcaactgagcctgttctattaagccacttgtttgattctgagccggattggagtgagatg
gaattcttgataaaatggaaaggccagtcccatttgcattgtcaatggaaatcattttca
gagctacaaaatcttagtggtttcaagaaggtcataaattacactaaaaaggtggtggag
gatatcaagtacaggaaggcaatctcacgcgaggagattgaggttaatgatgtgagcaaa
gagatggacttggatctcatcaagcaaaacagccaggtggaaaggataattgcagaccgc
atcagtaaagatagctcagatgatgtgattccagagtatctagtcaagtggcaaggattg
tcttatgccgaagcaacatgggagaaggatgtagatattacatttgcccaagatgccatt
gacgagtacaaggctcgtgaggctgcaatggccatacagggaaaaacagtggatccccag
cgcaaaaagagcaaaggtagtttacggaagcttgatgaacaacctgaatggttgagagga
ggaaagctgcgtgattatcagcttgagggtttgaattttcttgttaatagctggaggaat
gataccaatgtcattttagctgatgagatgggtctcggtaaaactgttcaatcagtatcc
atgcttggttttttacagaatacccaacagatccatggcccatttcttattgtcgtaccg
ttatcgaccttgtcgaactggtcaaaagaaattaggaagtggcttcctgatatgaatgtc
attgtatatgttggcacccgagcaagccgagaggtttgtcagcagtatgaattctataac
aaaaaagttggcaggccaataaaatttaatactttattaactacatatgaagtagttctg
aaggataaagcagtcctttcaaagattaagtggaattatctaatggttgatgaagctcac
aggttaaagaacagtgaagctcagttgtacacaactcttttggaatttagcaccaagaac
aagttgctcattaccggtactccattacagaacagtgtggaagagttgtgggccttgctc
cacttccttgacagtgataagttcaaaagtaaagatgagttcgtacaaaactacaagaat
ctcagctcgtttaatgagattgagcttgctaatcttcatatggaattgaggcctcacatt
ctacgcagagttattaaggacgtggaaaagtctttgcctccaaaaattgaaagaattctt
agggttgaaatgtctcctcttcagaaacagtactacaagtggattttggaacgcaacttc
catgacttaaacaaaggagttcgtgggaatcaggtttcacttttaaatattgtggtagag
ctgaagaaatgctgcaatcatcccttcctgtttgaaagtgcagatcatggttatggtgga
gactcgagcattaataatgcaagtaaaatggagagaattattttgagcagtgggaagttg
gttatacttgataagctgctttgtaggttgcatgagacgaagcatcgtgttttgattttt
tcccagatggtaagaatgctcgatatactagcagagtatatgtcacttcgtggatttaaa
ttccaaaggcttgatggtagtacaaaggctgaattgcgccatcaggcaatggatcacttc
aatgcacccaacagtgatgatttttgtttccttctttcaactcgggctggtggcctgggt
atcaatctagcaacagcagacacggttataatattcgattcagactggaatcctcagaat
gacttacaggcaatgagtagagctcacagaattggccaacaagaagttgttaacatctac
agatttgtcacaagcaaaagtgttgaggaggatatcctggagcgagctaaaaaaaagatg
gttcttgaccatttggtgatccagaaattaaatgcagagggtagattggagaagaaagaa
gccaagaaagggagttattttgacaaaaatgagctgtcagctatcttaagatttggggct
gaagagctttttaaggaagagaaaaatgatgaagaaagcaagaaaagactgttaagcatg
gatattgatgaaattcttgaaagagcagagaaggttgaagaaaaggaagctgatggagag
caggggcatgaattgttgagtgcatttaaggttgctaattttggtagtgctgaagatgat
ggaagcttctggagtcgttggataaagccagaagcagtagcccaagctgaagatgctttg
gctcctcgtgctgcaaggaacaccaagagttatgcagaagctgctcagcctgagcgaagt
agtaaaaggaagaaaaaggaatctgagcctcaagaacgagtcccgaagcgtcgcaaagca
gattattcagtcgcctcagcgccaatgattgaaggaacttcttctcaagtaagaagatgg
tcttctgggaacttgtccaagagagatgcactacgattttctcgtgcggttttgaaattt
gggaatgagagccaaattggcttaatagctgaggaagttggtggtgcagttggagcagct
ccacttgatgctcagattgagctttttaatgcactcattgatggctgtagagatgcagtt
gaagtaggaagtctggaccagaagggtcctatgttggatttttttggagtccctgtgaag
gctagtgatctactaacacgtgttcaagaacttcaactcctagcgaagcgcattagtcgt
tatgaagatcccattgcacaattccgtgtcttgacatatctgaaaccttctaattggtcg
aaaggttgcggatggaatcaggttgatgatgcaagattacttttgggaatatattaccat
ggattcggcaattgggaaaagataagactagatgaaaggcttggcctttcaaagaaaatt
gcgcctgtggaacttcaacaccatgaaacctttctaccccgtgctccgaatttgagagac
cgtgctaatgcacttttggaaatggaacttgctgtgcttggtgggaagaatgcgagtgca
aaagtgggtcggaagacttccaagaaggagaaggaaaatcttcttaatgtgtctatgact
ccaggccgggtcaaaaagggcaaagcaagttcttctatggttaatgctcaaatgaacagg
gacaggcctccaaaaccccagagagttgaaccgttagtgaaagaagagggtgaaatgtca
gacaatgaagaagtgtatgagaagttcaaggaagaaaaatggatggaatggtgtgaagat
gtcatggttgatgaaattaaaaccctgggacgtctccagcgtttgcagactactagtgct
aatcttccaaaggaaaaggtgctttcaaaaattcgaaattatttacagcttctaggacga
aggatagatcaaattgttctagagcatgaggaggaaccataccggcaagataggatgact
atgagattgtggaactatgtatctaccttttcaaatttgtccggggagagacttcatcaa
atttattccaaacttaaacaggagagggatgaggagcctggtccttcccatgccaatgga
gatgcaaatcattttactcctttctcccgcaatgttgagaggcagagaggttttagaaac
atgaccacttaccaagggtcagaaccatttcagcatggtcatgattcagctaaatttgaa
gcatggaaacgaaggagaagagcagaaactgataaccaattcacagtccagtccacttct
caaagaccacctttaagtaatggtatccccttatctgatccaagctcattggggattctt
ggggctgcgccagcaccattcgaaaatagacgaattggtaatgagaggccttataaaatg
cgacagactggggcaccaccgaggcaaggtttctcatcaggtgtcaagtag

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