KEGG   Ziziphus jujuba (Chinese jujube): 107406832
Entry
107406832         CDS       T04794                                 
Name
(RefSeq) coatomer subunit beta'-2
  KO
K17302  coatomer subunit beta'
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zju04131]
    107406832
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zju04147]
    107406832
Membrane trafficking [BR:zju04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    107406832
Exosome [BR:zju04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   107406832
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT140_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_SPT8 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 WD40_like WD_LRWD1 Beta-prop_IFT122_1st ChlI TPR_1 TPR_GEMI5 Clathrin TPR_CcmH_CycH
Other DBs
NCBI-GeneID: 107406832
NCBI-ProteinID: XP_048337202
LinkDB
Position
1:join(45293198..45293200,45293646..45293666,45293777..45293838,45294032..45294086,45294253..45294289,45294419..45294744,45294876..45295007,45295102..45295250,45296247..45296315,45296655..45296805,45296896..45296961,45297891..45298079,45298199..45298339,45298460..45298534,45298678..45298854,45298964..45299055,45299145..45299261,45299801..45299915,45300070..45300141,45300310..45300506,45300616..45300709,45300993..45301099,45301376..45301508,45301869..45302007,45302714..45302733)
AA seq 912 aa
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV
RSAKFISRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKGSRRVVIGYDEGTIMVKLG
REVPVASMDNGGKIIWAKHNEIQTVNIKSVGADFEAVDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESTSKIKIFSKNFQ
EKKSVRPTFSAEHIYGGTLLAMCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAI
ASDTSFYILKYNRDVVSSYLDSGRPVDEQGVEDAFELLHEMNERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDMDRANEILPSIPKEHHNSVARFLESRGMVEEALEVATDPDYRFELAIQLGILEVAKE
IATEVQSESKWKQLGELAMSTGKLEMAEECLKYAMDLSGLLLLYSSLGDAEGIAKLATLA
KEQGKNNVAFLCLFMLGRTEECLELLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLNK
VNPKAAESLADPEEYPNLFEDWQVALAVESKATETRGVYAPAEEYTNHVDKLPITLVEAF
RNMQVDEEEPFENGDANHDEVTEQNGEQSGEEHNGEDGSQEEAVVVDADSTDGAVLVNGN
EAEEEWVLTPRH
NT seq 2739 nt   +upstreamnt  +downstreamnt
atgcctctcagacttgaaatcaagaggaaacttgctcaaagatcagaaagagtaaaatct
gtggatctacatccaacagaaccatggattctggcaagtttgtattcaggaacagtgtgt
atttggaactaccagtctcagaccatggctaagtcttttgaggtcactgagttaccagtg
agatcagccaaatttatatcacgtaagcagtgggtggtcgctggagctgatgacatgttt
attcgtgtatacaattacaatacaatggataaggtcaaagtgtttgaggcgcatactgac
tacattaggtgtgtggccgtgcatcctacactcccatatgtactctcatcatctgatgac
atgctcataaagctttgggattgggagaaaggttggatttgtactcagatatttgaagga
cattcacattatgtgatgcaagtgacatttaatccaaaagacactaacacatttgcgagt
gcatcccttgaccgtactattaagatatggaaccttggctcccctgatccaaattttaca
ttggatgcccatcagaaaggagtaaactgcgttgattactttacaggtggtgacaagcct
tatctaattaccggttctgacgaccacactgctaaggtttgggattatcaaaccaaaagt
tgtgtccagacattagaaggccatacacacaatgtatctgccgtgtgttttcatcctgaa
cttcctataataattactggatctgaggatggaacagtccgcatatggcatgcaaccact
tataggcttgagaacacattaaattatgggcttgaaagagtttgggctattggatacatg
aaaggttcacgtcgagtagtgattggttatgatgaagggaccatcatggtaaaacttggc
cgtgaagtaccagttgctagtatggacaatggtggaaaaataatttgggccaagcataat
gaaattcaaactgtgaacattaagagtgtgggagcagattttgaggctgttgatggagaa
agattgcccttggctgtgaaggagttgggcacatgtgatctttacccacaaagcttaaaa
cacaatccaaatgggagatttgttgttgtctgtggagatggtgaatacatcatatatact
gctttagcatggagaaatcgatcatttggttcggctttggagtttgtttggtcgtcagat
ggagaatatgctgttagagagagtacctcaaagattaagattttcagcaaaaacttccag
gaaaagaagagtgttcgaccaaccttttcagcagaacatatttatggtggaactttactg
gcaatgtgctcaaatgattttatttgtttttatgactgggctgaatgcaggttgattcgg
cgaatagatgttaatgtgaaaaacctctattgggctgacagtggtgatctagtggctatt
gccagtgatacatctttctatatcctcaagtacaatcgcgatgtagtttcttcttatttg
gatagtggaagacctgtagatgaacagggtgtggaggatgcctttgagcttcttcatgaa
atgaatgaacgtgtcaggactggtttatgggttggggattgtttcatttacaacaactct
tcctggaggcttaattattgtgtcggtggcgaggtaaccacaatgttccacttggaccga
cctatgtacttgttgggttatcttgctagtcaaagccgggtgtatctgatagacaaagag
ttcaatgttatgggttacactttacttctgagtttgattgaatacaagactctggtaatg
cgaggagacatggacagagccaatgaaattttaccttcaattcccaaagagcaccataat
agtgtggctcgtttcttggaatcacggggtatggtagaggaagcacttgaagtggcaaca
gatcctgattacagatttgagctagccatacagcttggaatattagaagttgcaaaggaa
attgcaactgaagtgcaaagtgagtctaaatggaagcagttgggagaactagctatgtct
actggaaagttagagatggctgaggaatgtttgaagtatgcaatggacttgagtggtttg
ctactgctctattcttctttaggagatgctgaagggatagcaaaacttgcaaccctagcc
aaggagcaagggaagaacaatgttgcattcctttgtttattcatgttaggtcgtacagaa
gagtgtctggagctgctggtggagagtaatcggatacctgaggctgctttaatggcccga
tcttatcttccaagcaaggtttcagagatagtagctatttggagaaaagatcttaataag
gttaatcctaaagctgctgagtctctggctgatccagaggagtatcctaatttgttcgag
gattggcaagttgctcttgctgtagaatctaaagccacagaaacgaggggtgtatatgct
cctgcagaggagtatacaaaccatgttgataagctaccaataacccttgtcgaagctttc
aggaatatgcaagtggacgaagaggagccttttgaaaatggagatgcaaatcatgatgag
gttacagaacagaacggggaacagagcggggaggaacataatggagaagatgggagtcaa
gaggaggctgttgtggtggatgccgattctacagatggtgcagtactcgttaatggtaac
gaggctgaagaagagtgggtgcttacgccacgacactag

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