Ziziphus jujuba (Chinese jujube): 107407339
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Entry
107407339 CDS
T04794
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zju03041
]
107407339
Spliceosome [BR:
zju03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107407339
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
107407339
NCBI-ProteinID:
XP_048327597
LinkDB
All DBs
Position
4:join(29798965..29799147,29799846..29800055,29801228..29801290,29801372..29801445,29801559..29801654,29802782..29802839,29802978..29803082,29803213..29803294,29803753..29803865,29804094..29804564)
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AA seq
484 aa
AA seq
DB search
MSTSGTPQFRYTQTPSKVLHLRNLPWECTEEELIELCQPFGKIVNTKCNVGANRNQAFVE
FADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDSDTASSARNALDGRSIPRYLL
PEHLGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGIVQPALGPDGKKKEP
ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALVQYPDLTTAAVARE
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTIPDASLLAAQQASSLPPAPPVW
QNPQSAQMYPGNDFGATAAAHAQIPRGQVASWDPNMQAGRLTFVPAASSYPSQNFAAASV
PAYATAATSGGSLPLSQRSPITSGVPSSVITQPGVPPNLRPGGASPPGVQPGGVSPPGQS
YYGQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctcggggacgccccagttccgttatacgcagactccatcgaaggtccttcac
ctccgaaacctaccttgggagtgcacggaagaggagcttatcgagctatgccaacccttc
ggtaagatcgtcaacaccaagtgcaatgtcggcgccaaccgcaaccaggctttcgttgaa
tttgcagatttaaatcaggccatttctatggtttcatattatgcttcttcttcagagccc
gcccaagttcgtggtaaaactgtatatatacaatattcgaatagacatgaaattgtcaac
aataaaagtcccggagatgttcctgggaatgtcctgttggtgacaattgagggtgtagaa
gctggtgatgtgagcattgatgttattcacttggttttttctgcttttggctttgtgcac
aaaattgctacatttgaaaaggctgcaggttttcaggcattgattcagttcagtgattct
gatactgcatcttcggccagaaatgctttggatggaagaagtatacccaggtatttgctt
ccagagcatcttggttcatgccacttgcgtatttcttattctgcacacactgatctaaac
atcaagtttcagtctcaccgaagcagggactatacaaatccataccttcctgtgaatcct
actgcaatagagggaattgtgcagcccgctttaggtcctgacggtaaaaagaaagagcca
gagagtaatgtgcttcttgcttcaattgagaatatgcaatatgctgttactgtggatgtt
cttcacacggtgttttctgcttttggtactgtccagaaaattgctatatttgagaagaat
ggccaaacacaggcattagtccaataccctgatctcactaccgcagcagttgccagagaa
gctttagagggacattgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtgaaggctttcagtgacaaaagtagagattataccattcca
gatgctagtttgcttgcagcacaacaagcttcaagtctcccccctgctccgcctgtgtgg
cagaatcctcagtctgctcaaatgtacccagggaatgactttggtgccacagcagctgca
catgctcaaattccgcgtggtcaggtggcatcgtgggatcctaacatgcaggcaggaaga
ttgacttttgtaccggctgctagttcctatcccagtcaaaactttgcagcagcttcggtt
ccggcatacgccactgcagcaacatcaggtggttccttgcctctatcccaaaggagccca
attacatctggtgtgccttcttcagtaataacacagccaggagttccaccgaatttgcgg
cctggtggtgcttcacctccaggagtgcaacctggtggtgtttcaccccctggccaatct
tattatggtcaatag
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