KEGG   Ziziphus jujuba (Chinese jujube): 107407354
Entry
107407354         CDS       T04794                                 
Name
(RefSeq) uncharacterized protein LOC107407354
  KO
K12857  Prp8 binding protein
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107407354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zju03041]
    107407354
Spliceosome [BR:zju03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    107407354
 Complex C
   U5 SnRNP specific factors
    107407354
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_WDHD1_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_SPT8 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_IFT122_1st WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_RIG_1st Beta-prop_NWD2_C Beta-prop_Nup120_160 Beta-prop_DCAF12 RMC1_N Nbas_N
Other DBs
NCBI-GeneID: 107407354
NCBI-ProteinID: XP_015870114
UniProt: A0A6P3Z0H3
LinkDB
Position
1:complement(47523237..47524274)
AA seq 345 aa
MQVAPTESENALSIVGPRPMEWSTVPYSAPQAPGQSGKQRTSSLESPIMLLVGHQSAVYT
MKFNPAGTVIASGSHDKEIFLWNVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDK
TLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP
DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVTMTLQGHQDMITGMSLSPDGSYLL
TNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSSDGSKVTAGSSDRMVYI
WDTTTRRILYKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgcaagttgctcctactgagagtgaaaatgctttgtccatagttggtccaaggccaatg
gagtggtcaactgtgccatacagtgctccccaagcaccagggcaaagtggaaaacaaagg
acttcaagtttggaatcaccaataatgttgctggtgggtcaccagagtgctgtatacaca
atgaagtttaatccggctggaacagtcattgcatctgggtctcatgacaaggaaattttc
ttatggaatgtgcacggtgattgcaagaactttatggttttaaaggggcacaaaaatgca
attcttgatcttcactggactactgatggatcccagataatatcggccagtccagacaaa
actctgagggcatgggatgttgaaacagggaaacagataaaaaagatggcagaacactcc
tcctttgtgaattcatgctgcccatcacggagaggaccgcctcttatagtcagtggttct
gatgatggaactgccaaattatgggatatgcgtcaaagaggtgcaatacaaacatttcca
gataaataccaaattacagctgtgagcttctccgatgcatcagataagatcttcactggt
ggtattgacaatgatgtcaaggtttgggacttgcgcaagggtgaagtaacgatgactctt
caaggtcatcaagatatgataacgggtatgtcattgagtcctgatggttcttatcttctg
actaatggaatggactgcaagctgtgcatttgggatatgcgcccgtatgcacctcaaaat
cggtgtgtgaagatatttgaagggcatcaacacaactttgaaaagaacttgttgaaatgt
agctggtcatctgatggaagcaaggttacagctggtagttctgaccggatggtttatata
tgggatactactactcgacgtatattgtataagctccctggacacactgggtctgttaat
gagtgtgtcttccatcccagcgagccaattatcggatcttgcagcagtgataaacagatt
tatctgggggagatctga

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