Ziziphus jujuba (Chinese jujube): 107407367
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Entry
107407367 CDS
T04794
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107407367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zju03400
]
107407367
Enzymes [BR:
zju01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
107407367
DNA repair and recombination proteins [BR:
zju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107407367
Prokaryotic type
107407367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
107407367
NCBI-ProteinID:
XP_015870160
UniProt:
A0A6P3Z0T9
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All DBs
Position
1:complement(join(3580825..3580891,3581374..3581457,3581803..3581938,3582204..3582234,3582767..3582925,3583138..3583358,3583500..3583845))
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AA seq
347 aa
AA seq
DB search
MASRASSEIKTRKTLSDIFRPQHPAASAAKRLKPSSLGFSGSKQPPNPIHCQGVASLSKC
DDDGGVLPIPNDSESSRSSSSALTDQQISRMEFHRLLAKAKRNQKTCSGRVSKCKGGSGY
VKLQELLVEDTWLEALPGEFEKPYAMNLCKFVESEICGGGIPIYPPPHLIFNALNSTSFD
RVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLVNIFKELEQDLGCSIPSHGNLEKWA
VQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQQREGVVFLLWGNSAQEKIRLI
DTSKHHILKAAHPSGLSANRGFFGCRHFSRTNQLLKKMGIPTIDWQL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgagggcttcctccgaaatcaaaacccgcaaaaccctgtcggatatcttccgg
ccacaacacccagctgcttctgctgctaagcgcttgaagccctcttctttgggtttctcg
ggatccaaacaaccccccaatcccatacactgccagggcgttgcgtctctcagcaaatgc
gatgatgatgggggtgttcttcccattcccaatgactccgaatcctcccgctcctcctcc
tctgcgctcactgaccagcaaatctcgcgcatggaatttcacagattgctcgccaaagcc
aaacgcaaccagaaaacctgttctggtagagtttccaagtgtaaaggaggttcgggttat
gtgaagctacaagaactgctggtggaggacacatggttggaagcgcttccgggtgagttc
gaaaagccctatgcaatgaacctctgcaagttcgttgagagcgagatatgcggtggtggc
attcccatttatccgcctccccatttgatcttcaatgctctcaactccacctcatttgac
agggtcaaggttgttattcttggtcaggacccgtatcatggtccgggtcaagcgatgggt
ctctcgttctccgtgcctgaaggggtgaagattccctcaagtctggtcaatatattcaag
gaacttgagcaagatcttggctgttcaattccttctcatggaaatctagaaaaatgggca
gtgcagggagtactcttgctcaatgctgttctcactgttagaaaacatcaggcaaactct
catgcaaagaaaggatgggagcaatttactgatgctgttattaagacaatttcacaacag
agggaaggagttgtttttctcctatggggaaattctgctcaagagaagattaggttgatt
gacacatcaaagcatcacatactcaaagcagcgcatccttctgggttatctgcaaataga
ggcttctttggctgcaggcatttttctcgcacaaaccagcttctgaagaaaatgggaatc
cctaccatagattggcaactttaa
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