Ziziphus jujuba (Chinese jujube): 107408148
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Entry
107408148 CDS
T04794
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju00040
Pentose and glucuronate interconversions
zju01100
Metabolic pathways
Module
zju_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107408148
Enzymes [BR:
zju01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107408148
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
107408148
NCBI-ProteinID:
XP_060670530
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All DBs
Position
1:complement(join(45909246..45909476,45909578..45909691,45909801..45909909,45910030..45910111,45910227..45910434,45910718..45910861,45910977..45911117,45911239..45911364,45911456..45911518))
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AA seq
405 aa
AA seq
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MERRVSPTIQWGTWPPVAFLYELYSSIIFMVCIAATFGSGISEPIVNVLDSGAVGDGATD
DSQAFLKAWETVCGAASDTTPTLIIPEGKTFLLKPLTFEGPCGSTTIHVQVGGDIIAPSE
LSDWDGFDPENWIVFRDVNGLTVDGNGQIDGKGAKWWEALMFSGCNSLTVSGLRHTNSQK
SHISITECDNVFISSLHISAPEDSPNTDGIDISRSTNILINNTFIGTGDDCVAINNGSAY
INITWVTCGPGHGISVGSLGKDGEFNVVEEIHVEHCTFNGSDNGARIKTWQGGSGYAKKI
TYQDITLINTDNPIFIDQFYCPDDDCNNKTSAVNVSDVLFANMYGTSEVDTAIQLLCNGI
FGCTNVRVENVNITASGSDFQTISSCENAHGSSSNSNPQVDCLLS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcgtgtgtcacccaccattcagtgggggacttggccacctgtagcatttcta
tatgagctttacagtagcatcattttcatggtgtgcattgctgctacttttggaagcggt
atatcagaacccattgtcaatgtactcgactccggagctgtaggagatggagctactgat
gattcccaagcttttcttaaggcatgggaaacagtttgtggagctgcatcagatactact
ccaacactaatcattccagaaggaaaaaccttcttgttgaagcctctaacgttcgaaggt
ccatgcggttctactacaattcatgtgcaggtagggggagatattattgcaccaagcgaa
ttatctgattgggatggatttgacccggagaattggatcgtcttcagagatgttaatgga
ctcactgtggatggaaatggacaaattgatggcaagggggccaaatggtgggaggcattg
atgtttagtggatgtaatagcctaacagtgagtggattgagacatacaaacagccaaaaa
agccatatatcaataacagaatgtgacaatgtcttcatatccagccttcacatatcagcc
cctgaagacagcccaaatactgatggcatcgacatttcccgctcaaccaacattttaatt
aacaacaccttcattggaactggggatgactgtgttgctattaataatggttcggcttat
atcaacattacttgggtgacatgcggtccaggccacggaataagtgttggaagcctggga
aaagatggagaatttaatgtagtggaggaaatacatgtcgagcactgtaccttcaatgga
agtgataatggtgccaggatcaaaacatggcagggagggtctggatatgcaaagaaaatc
acataccaggacataactctgattaacaccgacaacccaatcttcattgaccagttttac
tgtcctgatgatgattgtaataataagacctcagcggttaacgtaagtgatgtattgttc
gctaacatgtacgggacatcagaagtagacacagcaatccaactgctttgcaatggaatt
ttcggttgcaccaatgtcagggtggaaaatgtcaacataacggcgtctggttcggatttt
caaaccatctcgtcttgtgaaaatgctcatggaagctcttccaattcaaatcctcaagtt
gattgtttgctgtcatag
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