Ziziphus jujuba (Chinese jujube): 107408360
Help
Entry
107408360 CDS
T04794
Name
(RefSeq) RHOMBOID-like protein 5
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zju01002
]
107408360
Enzymes [BR:
zju01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
107408360
Peptidases and inhibitors [BR:
zju01002
]
Serine peptidases
Family S54: Rhomboid family
107408360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DUF1129
DUF1616
Motif
Other DBs
NCBI-GeneID:
107408360
NCBI-ProteinID:
XP_015871232
UniProt:
A0A6P3Z866
LinkDB
All DBs
Position
1:complement(join(45877266..45877299,45877400..45877656,45877783..45877958,45878063..45878226,45878889..45879184))
Genome browser
AA seq
308 aa
AA seq
DB search
MGRWSESPPDIEKGRGMSRSPLPPPPPPHFSPPTPKPWFSWMVPLIFVVNVAMFVYSMYR
NNCPHNKAKGHHCILEDEFKRFSFQPFHENPLLGPSTNTLKKLGALEKALVVKDGQAWRL
LSCMWLHAGVIHIVSNMFSLLFIGIRLEQEFGFFRIGLLYVLAGFGGSLMSCINLDIAGK
PTLSVGASGALFGLLGAMLSELFTNWTIYANKCAALLTLIVIIAINLAFGFLPHVDNSAH
IGGFISGFFLGFILLVRPQYGYVSRRYIPAGYDIKRKSKYKWYQYILWFLALIALIIFYL
YCLIKIYK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggggaggtggtcggaatcaccgccggacatcgagaaaggtcgtggaatgtccagatcg
cctttgccgcctccaccgccaccacattttagccctcctacgcccaagccatggttctcg
tggatggtccctcttatatttgtggtaaatgttgccatgtttgtgtatagcatgtacaga
aacaattgcccccacaacaaggcaaagggccaccattgtattctcgaagatgaattcaag
aggttctctttccaacccttccatgaaaatcccctccttggcccttctaccaacacgctc
aaaaaactaggagctctagaaaaagctttggtggtgaaagatggccaggcatggcgtctc
ctttcttgcatgtggcttcatgctggtgttatccacatagtttccaatatgtttagcctt
ctgtttattggaatcagacttgagcaggaatttggatttttcaggataggactcttgtat
gtgcttgctggttttggtggaagcttgatgtcttgtattaatcttgatattgctggtaaa
ccaaccctatcagtcggtgcatctggtgcgctttttggattgttgggagccatgctttcg
gagctcttcacaaactggacaatctatgcaaataagtgtgcagcacttctaactctcatc
gtcattattgcaataaatttggcatttgggtttctacctcatgttgacaattcagctcat
ataggaggattcatctcagggtttttcctgggttttattcttctagttcgtccccagtat
ggatatgttagccgcaggtacattccagcaggatacgacataaaacgcaaatccaagtac
aagtggtaccaatatatattatggttcctggcattgatcgccttaattatcttctaccta
tactgcttgattaagatatataagtga
DBGET
integrated database retrieval system
