Ziziphus jujuba (Chinese jujube): 107409041
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Entry
107409041 CDS
T04794
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107409041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
107409041
03036 Chromosome and associated proteins [BR:
zju03036
]
107409041
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107409041
Chromosome and associated proteins [BR:
zju03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107409041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Phage_int_M
Motif
Other DBs
NCBI-GeneID:
107409041
NCBI-ProteinID:
XP_015871961
UniProt:
A0A6P3Z3C8
LinkDB
All DBs
Position
1:join(46550417..46552975,46553239..46553362,46553619..46553767,46554360..46554457,46554555..46554750)
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AA seq
1041 aa
AA seq
DB search
METLEFVAEILESRVTPQLKKRRISSVNDPSSLKVLREIESYLPSLLSPEYYMKPCLNEL
VMRELMNPGYSSHVPDFTIGRVGYGSVKYMGETDVRWLDLDNIVKFHRHEIVVYEDESVK
PAVGWGLNKTAEVTLLLQNTTDIDGVQEESIVKKLRQSTERQGAQFISFDPANGEWKFLV
HHFSRFGLSEDDEDDIVMDDATAVQDPVERNGGEVSDIDEETPLEHSGNLLSHSLPAHLG
LDPIKMNEMRMLMFPDEEEEEDDFNEIISHQKSSSSKEYVKPHLQNSTRISRRSSPTVVR
KTPLALLEYNHGSFDSNSPGTILMAQENKSTSLKTLKAEGFNLDLKREIPVSGYHSRNIV
DAGLFMGRSFGVGWGPNGTLVHAGSLVGGNDSPKVLSSVIKLEKVAIDKVVRDENNKVKE
ELQDLAFDSLLNLHKGINHEVKEVAFGGFKLKLQKVVSHRFMLSEICRSYADIIQKQLEV
PGLSSSARSAMMHQIMVWELIRVLFSEREHSQPLKSMGEDNEEDMMQDVKEVSPEADQEA
LPLIRRAEFSYWLQESVSPRVQHDISSLNDSNYLEQIFVLLTGRQLDAAVELAVSKGDVR
LACLLSQAGGSTVNRSDVAWQLDLWKINGLDFRFIEKERIRLYELLAGNIHDALHDLEVD
WKRFLGLLMWYKLPPDASLPAVFCTYQHLLDDGRAPCPVPVYFDEGLVEEDVIWRTKERF
DISYYLMLLHASEANESGFLKNMFSAFSSTHDPLDYHMIWHQRAVLEAVGTISSDDLHVL
DIGLVSQLLCLGKCHWAIYVVLHMPYREDFPYLQANLIREILFQYCESWSSQEHQRQFIE
NLGVPMPWLHEAMAVYYSYYRDHSKALEHYLECANWQKAHTIFVTSVAHKLFLSAKHSEI
WRLATSMEDHKSEIDKWDLGAGIYISFYLLRNSWLEDNNSMSELDSLESKSTVCRNFLGQ
LNESLAVWGGRLHVDARVAYSKMAEEICSMLLSESGEGSTRDVQLSCFDTVFSAPIPEDV
RSSHLQDAVSLFTCFLSEVAT
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggaaacattagaatttgtggctgaaattcttgagtcacgagttacacctcagttgaag
aaaagaagaatctcttcagtgaatgatccttcatctctcaaggttttgagagagattgaa
tcttatttgccttccttgctttcgcctgagtattatatgaaaccatgcttgaatgagctg
gtgatgagggaattgatgaatcctggttattctagccatgttcccgatttcacaattgga
agagttggttatggatctgttaaatatatgggagaaaccgatgttagatggctggattta
gacaatattgtgaagtttcacaggcacgagatagttgtatatgaagacgaaagtgtaaag
cctgcagttggttggggccttaacaagactgctgaagtaactttgctgctgcaaaataca
acagatattgatggggtgcaggaagaaagtattgtaaagaaattaaggcaaagcacagag
agacagggagctcagttcatatcatttgacccagcaaatggtgaatggaaattcttggtt
caccatttcagcaggtttggattgagcgaagatgatgaagatgatattgtaatggacgat
gcaacagctgttcaagatcctgtggagaggaatggtggtgaagtgtctgatattgatgaa
gaaactccgttggaacactctggaaacttgctttctcattctctacctgctcatcttggg
ctagacccaataaagatgaatgaaatgagaatgttgatgtttcctgatgaggaagaagag
gaagatgatttcaatgaaataatatctcatcagaaatcatcctcctctaaagaatatgtt
aaacctcatttgcagaattcaactaggattagccgtagatctagtccaacagttgtccgc
aaaactccattagcattgcttgagtataaccatgggagttttgactcaaattctcctgga
accattctgatggcccaagaaaataagagcacctctttgaagacattaaaagcagaaggt
tttaatctggacctcaagcgtgaaataccagtatctggataccattctcgtaacattgtt
gatgctggtttgttcatgggtaggtcatttggtgtagggtggggccccaatggaaccctt
gttcatgctggttcactggtaggtggtaatgattctccgaaggtgttatcatccgtaatt
aaattagagaaggttgctattgacaaagtggttagagatgaaaataacaaagtgaaagag
gaacttcaggacttggcttttgattctctactaaacctccataaagggataaatcatgaa
gtaaaggaagttgcatttgggggctttaaactgaagcttcaaaaagttgtctctcatcgt
ttcatgctttcagagatttgtaggagctatgctgatattattcagaagcagctggaggta
cctgggttgtcttcctctgctcgatcagcgatgatgcaccaaataatggtctgggagttg
ataagagtcctgttttctgaaagggaacacagccaaccgttaaaatctatgggtgaagac
aatgaagaagacatgatgcaggatgtgaaggaagtttctcctgaagctgaccaggaagct
cttccacttattcgaagggcagaattcagctattggttgcaggagagtgttagccctcgt
gtacaacatgacataagctccttgaatgattccaattatctagaacaaatatttgtactc
cttacggggcggcagctggatgcagcagtggaactggctgtttctaaaggagatgtgaga
ctagcttgtttactaagtcaggcaggtggatccactgtcaatcgttctgatgttgcatgg
cagcttgatctttggaaaatcaatgggttggattttcgtttcattgagaaggagaggata
aggctttatgagttgcttgctggcaatattcatgatgctttgcatgatcttgaagttgac
tggaagagattcttagggttattaatgtggtataaactaccacctgatgcttcattgcct
gctgttttctgcacttatcaacatcttcttgacgatggaagggctccatgtcctgtgcca
gtttattttgatgaaggactggtagaagaggatgtgatttggagaacaaaggagcgcttt
gacatatcatattatctgatgcttcttcatgcaagtgaagcaaatgagtctggctttttg
aagaatatgtttagtgccttctcttcgacgcatgatccacttgattatcacatgatttgg
catcaaagagcagtgttggaagctgttggtactatcagttcagatgatcttcatgttctt
gacataggacttgtttctcaactcttgtgtttggggaaatgtcattgggccatttatgtg
gtcctccacatgccatatcgtgaagattttccatatctgcaggctaaccttattagggag
atcttgttccaatactgtgaatcttggagttctcaagaacatcaacgccaatttattgag
aacttgggtgttcccatgccatggttgcacgaagcaatggcagtttattacagctactac
agagatcactcaaaggctctagaacactatcttgaatgtgccaattggcaaaaagctcat
actatttttgtaacttcagttgcacataaactattcttgtcagccaagcattcagagata
tggaggcttgctacttcgatggaggaccacaagtcagaaattgacaaatgggatttggga
gctggaatttacatttcattctatttattgagaaattcatggctggaagataacaattcc
atgagtgaattggattctcttgagagcaaaagtactgtttgtagaaactttcttggtcag
ttaaacgaatctttggcagtttggggtggtagattacatgttgatgccagagtagcatat
tcaaagatggctgaagaaatatgcagtatgctattatccgagagtggagagggctccacg
cgcgatgttcaattaagctgctttgacactgttttcagtgctccaattcctgaagacgtc
cggtcaagtcatttgcaagatgcagtgtctctttttacatgctttctgtcagaagtggct
acctaa
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integrated database retrieval system
