Ziziphus jujuba (Chinese jujube): 107409112
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Entry
107409112 CDS
T04794
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG3 isoform X1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zju04121
]
107409112
Enzymes [BR:
zju01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107409112
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107409112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
vWA-TerF-like
zf-C3HC4_2
zf-RING_2
Prok-RING_4
zf-RING_5
Sina_RING
DUF1140
TerY_C
Motif
Other DBs
NCBI-GeneID:
107409112
NCBI-ProteinID:
XP_048335249
LinkDB
All DBs
Position
7:complement(join(27546064..27546147,27547497..27547553,27547656..27547791,27547876..27548000,27549447..27549552,27549636..27549715,27549813..27549910,27550699..27550812,27550913..27551053,27551748..27551832,27553587..27553844))
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AA seq
427 aa
AA seq
DB search
MGNTESNENPNDDFLHEPHHQTHQNFHEPPHQTHQNFHEPDNQTYQTFHEALHHTPSHAG
SSMEHNHRHKHHSTARIADNFDSLDEVISALREAGLESSNLILGIDFTKSNEWTGKRSFN
RKSLHSIGSRPNPYEQAIAIIGRTLSPFDEDNLIPCLGFGDASTHDQHVFSFFPDHRPCH
GFEEALRRYREIVPHLKLSGPTSFAPIIDAAINIVEGSNGQYHVLVIIADGQVTRNPDTP
PGRFSPQEQATVNSIVAASQYPLSIILVGVGDGPWDSMQQFDDNIPQRAFDNFQFVDFTK
VMSENSETSKKEAAFALAALMEIPFQYRATQSLHFNREHIGGPGHRTRPLPPPQQVIDYD
NSVKSVLHDLNTSEPTAPPEQFCPICLTNPKDMAFGCGHTTCKDCSVTISTCPICREPIT
TRLRLYT
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggggaatacagaatctaatgaaaatcctaatgatgactttcttcatgaaccccaccat
caaacccatcaaaacttccatgaacccccccaccaaacccatcaaaacttccatgaaccc
gataaccaaacttatcaaacctttcatgaagctctccaccataccccttcacatgcaggc
agttcaatggagcacaaccatcgacataagcatcactcaacagctcgcatagctgataac
tttgactctctggatgaggttatttctgcgctaagagaagctggccttgaatcatcaaac
ttaatccttggtatagacttcacaaaaagcaatgagtggacaggcaaacgttcattcaat
aggaaaagccttcactctattggtagcagacctaacccttatgaacaagcaattgctata
attggtcgtacattgtcccctttcgatgaagataacctaataccttgtcttggatttgga
gatgcatcaacacatgatcaacatgttttcagttttttccctgatcatcgaccttgtcat
ggttttgaagaagctctcaggcgatatagagagatagttccacacttaaagttatcaggg
ccaacatcatttgccccgataattgatgcagcaattaatatcgttgaaggaagcaacggg
caatatcatgttcttgtcatcattgcagatgggcaggttaccagaaatcctgatacacca
cctggaaggttcagtcctcaagaacaagcaactgtaaactccatagttgctgctagccaa
tatcctctttcaattattttggttggagttggtgatggaccatgggattccatgcagcag
tttgatgataacattcctcagcgtgcatttgacaattttcagtttgtcgacttcacaaag
gtcatgtctgagaactcagaaacatcaaaaaaggaagcagcatttgcacttgctgctctc
atggaaattccatttcagtacagggccacccaaagcttacattttaatagagaacatata
ggtggtccaggtcatcgtacaaggccacttccacctccacaacaagtgattgattatgat
aattctgtcaaatcagtgctacatgacttgaatacatctgagccaactgcaccaccggaa
cagttctgtccgatatgcctgacaaatccaaaggatatggcttttggatgtggccataca
acctgcaaggactgtagcgtcacaatttcaacatgcccaatttgtcgagagccaataaca
acacgcctgagactttatacttaa
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