Ziziphus jujuba (Chinese jujube): 107409860
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Entry
107409860 CDS
T04794
Name
(RefSeq) DNA-3-methyladenine glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107409860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zju03400
]
107409860
Enzymes [BR:
zju01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
107409860
DNA repair and recombination proteins [BR:
zju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107409860
Prokaryotic type
107409860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-GeneID:
107409860
NCBI-ProteinID:
XP_015872770
UniProt:
A0A6P3ZD56
LinkDB
All DBs
Position
11:complement(join(10559839..10560041,10560142..10560199,10560274..10560344,10560459..10560582,10560718..10560789,10561094..10561351))
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AA seq
261 aa
AA seq
DB search
MKRTLRFKRVSPKLKKPIPTIGPVCDDDGTQPIQPLETKSTPISELPIDKMTILPSTFFQ
IDALDLAPRLLGKFLRRDDVVLQITEVEAYRPNDSACHGRFGVTARTAPIFGAGGHAYVY
LCYGLHAMLNVVADKEGVGAAVLIRSCAPISGLQTVQHRRGQKTDKPVLLTGPGKVGQAL
GLSTEWSNHPLYTPGGLEILDGPVPEKMLIGPRVGIEYALPEHANALWRFAIGGTPWISA
PKNTLRPHSSYNSCPKEAKNT
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaactctgcggttcaagcgagtctccccgaaactcaagaagccgattcccacg
atcggacccgtctgcgatgacgacgggactcaaccgattcagccactggaaacgaagtcc
acaccaatctcagagctgcccattgataagatgacgatcctgccctccacattcttccag
attgacgcccttgacctcgccccgcgtttgctcggcaagtttttaaggagagacgatgtt
gttctccagattactgaggtagaagcttacagaccaaatgattcagcttgtcatggtcga
tttggggttacggcaagaacagcccctatttttggagcaggtgggcatgcatatgtttac
ctttgctatggtcttcatgcaatgttgaatgttgttgctgataaagaaggagttggggct
gctgtcttaatccgttcctgtgcaccaattagtggattgcagacagttcagcaccgtcga
ggtcagaagaccgataagcctgttctccttacaggacctggaaaggttggtcaagcactg
ggactttcgacagaatggtctaaccatcccctttacacgcctggtggtttggaaatctta
gatggtccagtgcctgagaagatgttgattggtccccgtgttggcatcgaatatgcttta
cctgaacatgcaaatgcattgtggagatttgctattggaggaaccccttggattagtgct
cctaaaaacactctcaggccacattcatcttacaattcttgtccaaaggaggcaaaaaac
acttga
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