Ziziphus jujuba (Chinese jujube): 107410417
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Entry
107410417 CDS
T04794
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
KO
K13111
WD40 repeat-containing protein SMU1
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zju03041
]
107410417
Spliceosome [BR:
zju03041
]
Complex B
Other components
Complex B specific factors
107410417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
LisH_TPL
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_VPS8
Beta-prop_NWD2_C
Beta-prop_ACSF4
WDR90_beta-prop_4th
Ge1_WD40
Beta-prop_RIG_2nd
Beta-prop_Nup120_160
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_IP5PC_F
DUF7165
Beta-prop_WDR19_1st
Beta-prop_LRRK2
VPS8_N
Beta-prop_IFT122_2nd
zf_topless
Beta-prop_CGLA
7TMR-HDED
Motif
Other DBs
NCBI-GeneID:
107410417
NCBI-ProteinID:
XP_015873329
UniProt:
A0A6P3ZI38
LinkDB
All DBs
Position
10:complement(join(2027050..2027148,2027629..2027680,2027758..2027858,2028173..2028280,2028622..2028681,2028770..2028896,2029236..2029363,2029544..2029639,2029759..2029812,2029896..2029982,2030662..2030765,2031228..2031311,2031942..2031990,2032178..2032330,2033311..2033521,2033985..2034013))
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AA seq
513 aa
AA seq
DB search
MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSVETFIADINSGRWDAI
LPQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEH
LLVRTYFDPNEAYQESTKEKRRAQIAQALAAEVTVVPPSRLMALIGQALKWQQHQGLLPP
GTQFDLFRGTAAMKQDVDDMYPATLAHTIKFGTKSNAECARFSPDGQFLVSSSVDGFIEV
WDYISGKLKKDLQYQADEAFMMHDDPVLCVDFSRDSEMLASGSEDGKIKVWRVRTGQCLR
RLERAHSRGVTSVIFSRDGSQLLSTSFDCTARVHGLKSGKLLKEFRGHGSYVNDAIFTND
GTRVITASSDCTVKVWDVKTTDCLQTFKPPPPLRGGDASVNSVHLFPKNTDHIVVCNKTS
SVYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNIYCFSYQSGKLEHLM
KVHEKDVIGVTHHPHRNLVATYSLDCTMKLWKP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtctactctagaaatcgaagctcgagatgtgatcaagattgtgcttcaattttgtaaa
gagaactctttgcatcaaacctttcagacattgcagagtgagtgccaggtttctttaaat
actgtagacagtgtagagacatttatcgctgatataaatagtggaaggtgggatgcaata
ttgcctcaagtggctcagcttaagcttcctaggaataagctggaagatttatatgagcag
attgtattagaaatgattgaactacgagaattggatactgctcgtgctattttaaggcaa
actcaagtaatgggtgtcatgaagcaagaacagccagaacggtacttgcgacttgaacat
ctccttgtgagaacttattttgatccaaatgaggcttatcaagagtcaacaaaagagaaa
cgccgtgcacaaattgctcaagcacttgcagcggaagttactgttgtgcctccttcacga
ttaatggctttaattggtcaggctcttaagtggcagcaacaccaaggattacttcctcca
ggaacacaatttgacttgtttcgaggaactgctgctatgaaacaagatgtagatgacatg
tacccggcaactctggcacacacaataaagtttgggacaaaaagtaatgcagaatgtgct
cggttctcaccggatgggcaatttcttgtatccagttctgttgatggatttattgaggtt
tgggactacataagtgggaaactgaagaaggatcttcaataccaggctgatgaagctttc
atgatgcatgatgatccagtcctttgtgttgattttagcagggactccgagatgcttgca
tctgggtcagaagatggaaaaatcaaagtttggcgtgtaaggactggtcagtgcttgcgt
cgtcttgaacgtgcacattctcggggtgtcacaagtgttattttctctcgagatggaagc
cagttactaagtacatcatttgactgtacagcaagagtccatggtctaaaatctgggaag
ttgttgaaagaatttcgtggtcatggatcatatgtaaatgatgcaatttttacaaatgat
gggactcgtgttatcactgcatctagtgattgcacagtcaaggtctgggatgtgaagact
actgactgtctacagacatttaagccaccacctccattaaggggaggtgatgcttctgtg
aattctgttcatcttttcccaaagaataccgatcacattgttgtatgcaataagacatcg
tccgtctacattatgactcttcaaggacaggttgtgaagagtttttcatctggtaaaaga
gaaggaggagactttgtggcagcctgtgtgtcacctaaaggggaatggatttattgtgtt
ggtgaagacaggaacatatactgtttcagctaccaatctggtaaactagagcatctaatg
aaggtccatgaaaaagatgtgattggggtaactcatcatccccacagaaatcttgttgcc
acctacagtttagactgcacgatgaaattgtggaagccttga
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