KEGG   Ziziphus jujuba (Chinese jujube): 107410510
Entry
107410510         CDS       T04794                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03082  ATP-dependent chromatin remodeling
zju03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107410510
   03083 Polycomb repressive complex
    107410510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zju03036]
    107410510
Enzymes [BR:zju01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     107410510
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     107410510
   HDAC complexes
    Sin3A-HDAC complex
     107410510
    BRAF-HDAC complex
     107410510
    REST complex
     107410510
    SHIP complex
     107410510
    MiDAC complex
     107410510
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     107410510
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    107410510
  Chromatin remodeling factors
   NuRD complex
    107410510
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 107410510
NCBI-ProteinID: XP_015873427
UniProt: A0A6P3Z8M0
LinkDB
Position
10:join(3478556..3478592,3479075..3479187,3479299..3479416,3479587..3479661,3479742..3479961,3480569..3480632,3481499..3481591,3481729..3481837,3482404..3482453,3482551..3482641,3488825..3488895,3489123..3489221,3489593..3489659,3489867..3489952)
AA seq 430 aa
MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFSNELARYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKHHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKFGDMFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT
IISKVVEIYQPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTLETGVLLDTELPNDIPENEYIKYFAPEFSLKIPNGHIENLNSKSYLSTIK
VQVLENLRYIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERVDQHTQDKHIQRDDEYYDGD
NDNDQNMDDV
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcgctccaaagacagaatctcctacttctacgatggggacgtgggaagcgtttacttt
gggcctaaccatccaatgaagccccaccgactgtgtatgacccaccatctcgtcctctcc
tacgagctccacaaaaagatggaaatctataggcctcacaaggcatatccggttgagctt
gctcaattccattcagctgactatgttgagttcttacatcggattacacctgacacgcag
catttgttctcgaatgaattggcaagatataaccttggagaagattgtcctgttttcgag
aacttgtttgaattttgtcaaatttatgctggtggaacaatagatgctgcacgcagactg
aacaatcaactttgtgacattgctataaactgggctggtggactacatcatgccaagaaa
tgcgaggcatctggattttgttatatcaatgacttggtcttgggaatcttggagctccta
aaacatcatgcccgtgttttatacattgatatagatgttcatcatggtgatggtgttgaa
gaagccttttattttactgacagggtaatgactgttagttttcacaagtttggagatatg
ttttttcctggaactggtgatgtaaaggaaataggagaaagagaaggaaaattttatgct
attaatgttccactcaaagatggaatagacgacactagcttcactcgcctgttcaaaact
attatttccaaggttgttgaaatttatcaaccaggtgtcatagttctccaatgtggggca
gattcacttgctggagatcgcttgggctgcttcaatctctccattgacggtcatgctgaa
tgtgttcggtttgtgaagaaattcaatttgccattattggttactggaggtgggggatat
acaaaagagaatgttgcacgttgttggactcttgaaactggagttcttctagacacagaa
cttcccaatgatatcccagagaacgagtatattaagtattttgccccggagttttcattg
aagataccgaatggtcatatagagaatttaaatagtaaatcatatcttagcacgataaaa
gtgcaggttttggaaaatctccgctacatccaacatgctcccagtgtacaaatgcaagag
gttccgccagatttttatattcccgattttgatgaagatgagcagaaccctgatgagcgt
gtggatcagcacacccaagacaagcacattcaacgtgatgatgaatattatgacggggac
aatgataatgatcagaacatggacgatgtgtga

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