Ziziphus jujuba (Chinese jujube): 107410631
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Entry
107410631 CDS
T04794
Name
(RefSeq) pre-rRNA-processing protein las1 isoform X6
KO
K16912
ribosomal biogenesis protein LAS1
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zju03009
]
107410631
Ribosome biogenesis [BR:
zju03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
107410631
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Las1
Motif
Other DBs
NCBI-GeneID:
107410631
NCBI-ProteinID:
XP_015873572
UniProt:
A0A6P3Z727
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All DBs
Position
10:complement(join(6297088..6297920,6298865..6299155,6299688..6299714,6300991..6301165,6301597..6301652,6301793..6301899,6301989..6302093,6302245..6302336,6302465..6302674))
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AA seq
631 aa
AA seq
DB search
MEPVLALEDEPRDIDQHEWLSASPPLSSSSSSSSSYSLKLVPWLRWDEWLFVYHSLFSDS
VDTVASALRKISAWRSRGCVPVTVEVTASIVEIQQKDPYFRKDQSNDALGSRANQFSDGE
LSEEMLAMLYCMAIMRLVNGVVEKTRKKTEVSIAVAAAKIGIPRMLIDVRHEGSHRELPA
LQVVRSASVKALDWLKVYYWEPQKKAIPFQGDGIANIRKGIKNKLHELAFCLKAKQHLHS
GSSSEKGKRKLHSSKSAGSKKQLSKILKNLVGLYASYSSDVVLVLLDLLLKALKSSDLLE
PPVDAQVFPNIDTLLNEWKLVITKLSNKEPELLLTLLTAVLDMIETHDAMKYEMDYRPEG
RHIEHLSSLFTWLVRNFKELKSRHHKDSASEIKVSSSETTMSKALVMELLRRCLMLASSG
NNQVMDSAFHLAQLIGNDHLIGKLSKFSVLVSSNSNVIGDDSSNMNFKNLLIQQDESICQ
AAKKLELIKLHQMKGKIVKKADEVLNSNRWVVARSWNPCPIGMLPRAVGSSGCLPVLDYN
DDQNKVVEIPQTKGNWELNHCNRKREASSDIQLLDDSSIKKKRVTVEDSISNHEDALLMD
GVNGRLMIGGVWKEVGQEELLAIKSSVRILI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggagccagttttggcgttagaagatgagcctagagacattgatcagcacgagtggttg
tcagcgtcgccgccactgtcgtcgtcgtcgtcttcatcatcatcgtatagcctcaaattg
gtgccgtggttgaggtgggacgaatggctcttcgtataccactcgctcttctcagattct
gtggacactgtggcttccgctcttagaaaaatatcggcatggcgaagcagaggatgtgta
cctgttaccgtcgaagttacggcttccatcgttgaaattcaacaaaaagatccttacttt
agaaaggatcaatctaatgatgctctgggtagtcgagctaatcagtttagtgatggtgag
ctttcagaagaaatgcttgcaatgttgtattgcatggcaatcatgaggcttgtgaatggt
gtagttgagaaaacacgtaagaaaactgaggtttccattgccgtagctgctgccaaaatt
ggtattccacgtatgctgattgatgttcgacacgagggttctcatcgtgagcttcctgca
cttcaggtggttcgtagtgcctctgttaaggcacttgattggttgaaagtttactattgg
gagcctcagaagaaggcaattccatttcagggtgatggaattgctaacatcagaaaagga
ataaagaataaactccatgaattggcattctgcttgaaagctaagcagcatcttcattct
ggctcatcatcagagaagggaaaacgcaagctccattcatcaaaatctgcaggttctaag
aaacagcttagcaagattttaaaaaatcttgttgggttatatgcttcctattcctctgat
gttgtattggtattgttggatctcttgctgaaggccttaaagtcctcagatttgctggaa
cctccagtagatgcccaagttttccccaacatagatacattgttgaatgaatggaagctt
gtaatcacgaagttatcaaataaggagccagagttacttctaacgcttcttacagcagtt
ctagacatgattgagactcatgatgccatgaaatatgaaatggattacaggccagagggt
cgtcatattgaacacctctcttctcttttcacatggcttgttagaaatttcaaggagtta
aagtctcgtcatcacaaagattctgccagtgagataaaagtttcgtcatcggaaacaact
atgtctaaagcattagttatggaacttttacgtaggtgccttatgttggcttcttctggg
aacaatcaggtcatggattcggctttccatcttgcgcagttgattggtaatgatcatctt
attgggaaactgagcaagttctctgtcttagtttcatcaaattcaaatgtcattggagat
gattcttctaatatgaattttaagaatcttcttatccagcaagatgaatccatttgtcaa
gcagccaagaagcttgagttgattaaacttcaccagatgaagggaaaaatagtgaagaag
gcagatgaagtgctaaattcaaaccgatgggttgtggcaagatcatggaatccatgtcca
attggtatgttgcctcgtgctgttgggtcttctggatgtcttcctgttctcgactacaat
gatgaccagaacaaggttgttgaaataccacaaacaaaaggtaactgggaattgaaccat
tgtaacagaaagagagaagctagttctgatattcagctactagatgactctagtatcaag
aagaagagggtgacagttgaggacagcatatctaatcatgaggatgctttgttaatggat
ggtgtcaatggtcgtctgatgataggcggcgtttggaaggaagttgggcaagaagagcta
cttgccattaagtcatcagtaaggatattgatctaa
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