KEGG   Ziziphus jujuba (Chinese jujube): 107410747
Entry
107410747         CDS       T04794                                 
Name
(RefSeq) nuclear cap-binding protein subunit 1
  KO
K12882  nuclear cap-binding protein subunit 1
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03013  Nucleocytoplasmic transport
zju03015  mRNA surveillance pathway
zju03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107410747
  09122 Translation
   03013 Nucleocytoplasmic transport
    107410747
   03015 mRNA surveillance pathway
    107410747
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107410747
   03041 Spliceosome [BR:zju03041]
    107410747
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     107410747
Spliceosome [BR:zju03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    107410747
SSDB
Motif
Pfam: MIF4G_like MIF4G_like_2 MIF4G THB XRCC4_CC
Other DBs
NCBI-GeneID: 107410747
NCBI-ProteinID: XP_048322389
LinkDB
Position
10:join(6869200..6869283,6869415..6869474,6870214..6870270,6870601..6870672,6871698..6871760,6872866..6873042,6873718..6873849,6874609..6874675,6875665..6875864,6876401..6876471,6876624..6876708,6877705..6877773,6877897..6878015,6878324..6878462,6879513..6880004,6880262..6880561,6880935..6881116,6881220..6881328,6881713..6881823)
AA seq 862 aa
MSSWKSLLLRIGDKCPDYANSSDFKDHIETCFGVLRRELEHSANDILKFLIECAEQLPHK
IPFYGTVIGLINLEDEDFVKKLLESTQNNFQDALDSGNCNRIRTLLRFLTVMMCSKVLQP
SSLVVVFETLLSSAATTVDEEKGNPSWQARADFYIQCILSCLPWGGAELTEQVPEEVERV
MVGIEAYLSIRRHGSDAGLSFFEDDDDSEKGNGHKDFLEDLWGRIQVLSSNGWKLDSVPR
PHLSFEAQLVAGKSHEFGPINCPDQPTQPSTNSAISYGKQKHEAELRYPQRIRRLNIFPA
SKTEDLQPIDRFIVEEYLLDVLFYFNGCRKECASFMVGLHVPFRYEHLMAETIFSQILML
PHPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRTRLILWFSHHLS
NFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPGLEALLPPK
GGPNFKFSGGDSGELHALSVELSNLVKGRAAAREMIVWIEENVFPVHGLELTLKVVVQTF
LDIGSKSFTHLITVLERYGQVIAKICSDQDKQVMLIAEVDSFWKNNAQWAAIAIDRMMGY
RLLSNLAIVRWVFSPENIEQFHLSDRPWEILRNAVSKTYNRICDLRKEISSLKKGILSAE
EAAAKAKMELETAELKLSLVDGEPVLGENPVRLKRLKSYAEKAKEEETSIRESLEAKEAL
LARALDENEALFLSLYKNFSTVLNERLPDASRAGTLQELKSIYADSMAIDIEESSEMDVD
NENGKPKKKSQSNGGKMGVYNLGEKEQWCLSTLGYLKAFSRQYASEIWPHIDKLDAQVLT
DEMHPLFRKAVYCGLRRSMNGV
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgagcagctggaaaagtttgctacttcgaatcggcgacaaatgcccagactacgccaac
tcttccgacttcaaagaccatatcgaaacatgctttggtgttcttcggcgagagctggag
cactccgccaatgacattttgaagttccttatcgagtgtgctgaacaattgcctcacaag
attcctttttacggaacagtgattggtttgatcaacttggaagatgaagattttgttaag
aaattactggagagtactcaaaataactttcaggatgccctagattctggaaactgtaac
agaattcgtactttattgagattcctgactgttatgatgtgcagtaaagtccttcaaccc
agttctttagtggttgtttttgaaacattattgtcatcagctgccacaacagttgatgag
gagaaagggaatccatcatggcaagcacgagctgacttttatattcaatgtatcttatct
tgcctcccttggggaggagcagaacttactgagcaagttcctgaggaggttgaaagagtt
atggttggcatagaagcttatttaagcatcagaaggcatggttctgatgctggtctgtct
ttctttgaggatgatgatgatagtgagaaaggaaatggtcacaaggatttcttggaggat
ttatggggccgcatacaagtattatctagcaatgggtggaagcttgatagtgttccacga
cctcacctatcatttgaagcacagctagttgctggaaagtctcatgaatttgggcccatc
aattgccccgatcaacccactcagccttcaacaaattctgctataagttatggtaaacaa
aagcatgaagcagaattgaggtatcctcaaaggatacgccgacttaatatatttcctgca
agcaaaactgaggatctacaacccatagatcgcttcattgtggaagagtatcttctggat
gtgcttttttacttcaatggctgtcgcaaggaatgtgcgtcattcatggttggtctacat
gtgccctttagatatgaacatcttatggcagagacaattttctctcagatacttatgcta
ccacatcctccattcaagccaatatattacacgctggttattatcgacctctgtaaggct
cttcctggcgcctttcctgctgtagtagctggtgcagttcgtgctctttttgaaaaaata
gctgatctggatatggaatgtcgcacacgtctcattctttggttttcacaccatctatca
aactttcagttcatctggccttgggaagagtgggcttatgtcctagatctcccaaaatgg
gctccccaacgtgtatttgttcaggaggttttggaaagagaagttcgtttgtcatactgg
gacaaagttaagcagagtattgaaaatgcccctggtttagaagcgttgcttcctcccaag
ggtgggccaaacttcaaatttagtggtggagatagtggtgaactgcatgcactgtctgta
gaactcagtaacttggtgaaaggaagagcagctgcccgtgaaatgattgtatggatagaa
gaaaatgtatttcctgtgcatggattagaacttaccctaaaagtggttgtgcaaacattc
ttggacattggatcaaaaagtttcactcatttaattactgtactggagagatatggtcaa
gtcattgcaaagatatgttcggaccaggataagcaagtcatgttaattgcagaagtagat
tctttctggaagaacaatgcacaatgggcagctatagcaattgataggatgatgggttac
cggcttttatctaatttggccattgtgaggtgggtcttctctccagaaaacattgagcag
ttccacctgtctgatcgtccttgggagattctaaggaatgcagttagtaagacatataac
cgtatctgtgatctgaggaaagagatatcctccctgaagaagggtattttatcagctgaa
gaagctgctgcaaaggcaaaaatggagcttgagactgccgagttgaagctttcactagtg
gatggtgaacctgttcttggtgagaaccctgtgaggttgaagcgtttaaaatcatatgca
gagaaggcgaaagaggaggagacgtcaattcgtgaatctttagaggctaaggaggctctt
cttgcccgagcccttgatgaaaatgaggcactattcctctctttgtacaagaacttctct
actgtactgaatgaacgcttgccagatgcatctagagctggaacattgcaagagttgaag
tctatttatgcagatagcatggctattgacattgaagaatcgtcagaaatggatgtggac
aacgagaatggaaaacccaaaaaaaaaagtcaatcaaatggtgggaagatgggcgtttat
aatttaggtgagaaagaacagtggtgtttgtcaactctaggctatctcaaagcattctca
aggcaatatgcttctgagatatggcctcatatcgacaagttggatgcacaagtattaaca
gatgagatgcatcctcttttccggaaagcagtttattgtggtctgcgtcgatcgatgaat
ggggtttga

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