Ziziphus jujuba (Chinese jujube): 107410828
Help
Entry
107410828 CDS
T04794
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic isoform X1
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju00730
Thiamine metabolism
zju01100
Metabolic pathways
zju01240
Biosynthesis of cofactors
Module
zju_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
107410828
Enzymes [BR:
zju01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
107410828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
107410828
NCBI-ProteinID:
XP_015873790
UniProt:
A0A6P3Z9D4
LinkDB
All DBs
Position
10:complement(join(7426027..7426707,7427085..7427911,7428388..7428515,7428670..7428982,7430239..7430242))
Genome browser
AA seq
650 aa
AA seq
DB search
MYMASVHGTLTSVVCKKGNSSSPAKFPSTAFLPGFDTVGCVSSAYRKEICPPPLSSGPRA
TLTFDPLATNADRAKQRKHTVDPTAPDFQELPSFEQCFPRSTKEYREVVHEQTGHVLKVP
FRRVHLAGDEPDFDTYDTSGPQNISPRTGLAKVRKEWIDRREKLGAPRYTQMYYAKQGII
TEEMLYCATREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRKFLVKVNANIGNSAV
ASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVNG
IAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLA
YHKENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWE
KDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANI
GALGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPQAQAWDDALSKARF
EFRWMDQFALSLDPMTAMSFHDETLPSDGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHG
YGSAEEAVQHGMDAMSAEFLAAKKTVSGEQHGEIGGEIYLPASYLKTSER
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcgtcagtccatggtacactgacatcagttgtgtgcaagaagggaaacagc
tcttctccagcaaagttcccaagcactgccttcttgccgggatttgatactgtggggtgt
gtttcaagtgcgtatagaaaggaaatatgccctcctcctctgagctcaggtcccagagca
acacttacctttgatcccctggcaaccaatgcagatagagctaaacaaaggaagcatact
gttgatcccactgctcctgatttccaagaacttccgtccttcgagcaatgtttcccaagg
agcacaaaagaatacagggaagttgttcatgaacaaactggtcatgtactcaaagttcct
tttcgacgagttcacctcgctggagatgaaccagactttgacacctatgataccagtggt
ccacaaaacattagcccacgaactggactcgctaaagtgcgcaaagagtggattgacagg
cgtgagaaattaggtgcacctagatacactcaaatgtactatgctaagcagggaattata
actgaggaaatgctgtattgtgcaactcgtgagaaacttgaccctgagtttgtgaggtcc
gaagttgctcgtgggcgggcgatcattccttccaataagaagcacttggagctggaacca
atgatagttggaagaaagtttttggtcaaagttaatgcaaatattggaaactctgctgtt
gcgagctccattgaagaggaagtttacaaagtccaatgggcaaccatgtggggtgccgat
actgtcatggatctttctacaggtcgccacatccatgagacccgtgagtggatcctccgg
aactctgctgtgccagtagggactgtacccatatatcaagcacttgaaaaagtgaatggc
attgcagaaaatcttagctgggaagtgttcagagacactctgattgaacaagcggagcag
ggtgtagattacttcaccatacatgctggtgttctcctgcgttacatccctctgacagca
aagcgtatgacagggattgtctcacgcggaggatctatccatgcaaagtggtgcttggct
tatcataaagagaatttcgcttatgagcactgggatgacatacttgacatctgtaatcaa
tatgatgtggctttatctataggcgatggattgagacctgggtccatctatgatgccaat
gacactgctcaatttgcagagctccttactcaaggagaactgacccgcagagcttgggaa
aaggatgtacaggtaatgaatgaagggcctggacacattccaatgcacaagattcctgaa
aacatgcagaaacagctggaatggtgtaatgaagcgcctttctacactcttggcccttta
acaactgatattgctcctggatacgatcacatcacctctgccattggtgctgccaatatt
ggagctctgggaactgcacttctctgttacgtaactcccaaagaacacctaggattgcca
aatcgtgatgatgtgaaggcaggagttatagcatacaagatagctgctcatgcagctgat
ttagctaaaggtcacccacaggctcaagcttgggatgatgcattaagcaaggcaagattt
gagttccggtggatggatcagtttgctttgtctctggaccccatgactgccatgtccttc
catgatgaaaccttgccatcagatggtgccaaggtggcccacttctgctctatgtgtgga
ccgaagttctgctctatgaagattacagaggatgtgcggaagtatgctgaggagcatggt
tacgggagtgctgaggaagctgtgcagcatggaatggatgccatgagtgctgagtttttg
gctgctaagaaaactgtcagtggagagcagcatggtgaaattggtggtgaaatctacttg
cctgcaagttacttgaaaacctcagagaggtga
DBGET
integrated database retrieval system
