Ziziphus jujuba (Chinese jujube): 107411127
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Entry
107411127 CDS
T04794
Name
(RefSeq) THO complex subunit 4A
KO
K12881
THO complex subunit 4
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03013
Nucleocytoplasmic transport
zju03015
mRNA surveillance pathway
zju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107411127
09122 Translation
03013 Nucleocytoplasmic transport
107411127
03015 mRNA surveillance pathway
107411127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
107411127
03041 Spliceosome [BR:
zju03041
]
107411127
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107411127
TREX complex
107411127
Spliceosome [BR:
zju03041
]
Complex C
Other components
EJC/TREX
107411127
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107411127
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
DUF6563
RRM_3
RRM_10
Motif
Other DBs
NCBI-GeneID:
107411127
NCBI-ProteinID:
XP_048324335
UniProt:
A0ABM3IAE3
LinkDB
All DBs
Position
10:complement(join(9774101..9774275,9775244..9775428,9775517..9775585,9776232..9776378,9776521..9776685))
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AA seq
246 aa
AA seq
DB search
MSDPLSMSLDDIIKNNKKSGSGGNNRGRGRPSGPGPARRGPSRAANRVTPYATAKAPETL
WQHDMYLDQGSAFTAQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYAIHY
DRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAVAPQVANGSF
GNSNGFSRGGQGRGGAFGRTRGGNSGGRGRGRGRGRGRGGGRGEKVSADDLDADLEKYHA
EAMQEN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccctctcagtatgtctctcgacgacatcataaagaacaacaagaagtccgga
tccggcggcaataatagaggccgcggcagaccctccggacccggtccggcccgccgcgga
cccagccgcgctgccaatcgtgtgactccgtatgcaactgcaaaggcaccggagacccta
tggcagcacgatatgtatttggatcaggggtcggctttcactgcacaagctggacgagcc
tccgccattgaaaccgggacgaagctctatatatctaacctcgattacggcgtttcaaac
gaggatattaaggaattgttttctgaagttggtgacctgaagcgttatgcaattcattac
gaccgtagtgggagatcgaagggaacggcggaggtagtcttctcgcgacgaggagatgct
gtggcagcagtcaagagatacaacaacgttcagcttgatgggaagccgatgaagatagag
attgtgggaacaaacattgcgacccctgctgtggctcctcaagttgctaatggctctttt
ggaaattcaaatggattttcaaggggtggacagggtaggggtggtgcatttggacggaca
cgtggtggcaacagtggtggtcgtggtcgtgggaggggccgtggacggggaagaggcggc
ggccgtggtgagaaggtgtctgctgacgatcttgacgctgatttggagaaatatcatgct
gaagcgatgcaagaaaattga
DBGET
integrated database retrieval system
