KEGG   Ziziphus jujuba (Chinese jujube): 107411173
Entry
107411173         CDS       T04794                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1 isoform X1
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107411173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zju03021]
    107411173
Enzymes [BR:zju01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     107411173
Transcription machinery [BR:zju03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     107411173
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 107411173
NCBI-ProteinID: XP_015874201
UniProt: A0A6P3ZKU7
LinkDB
Position
10:join(11264914..11264999,11265134..11265263,11265478..11265627,11267686..11267848,11268702..11268892,11269060..11269169,11269318..11269414,11270857..11271072,11271162..11271310,11271409..11271547,11272064..11272204,11273324..11273512,11274460..11274673,11274950..11275043,11276094..11276328,11277253..11277444,11278043..11278141,11279247..11279450,11279531..11279806,11280854..11281001,11281147..11281298,11282885..11283040,11283115..11283231,11283338..11283423,11284009..11284213,11284331..11284533,11286552..11286606)
AA seq 1398 aa
MAAVANRDQTQSIVFTKQLFIEDVGPRRLKSMQFTTLSGSEISKLAEVQVWKGQYYDSNR
KPIENGLLDPRMGPPNKNSKCATCHGSYAECPGHYGYLKLALPVYNVGYISSIVDILKCI
CKNCSRILLEDERRQKLLKKMRSPKMDALKKTRLMKDIVKDLSNKAIKCYRCGYVNGKVK
KSTASQGVKIFHDRSRLFDGLEDYKSAISHIKDSKISLDMSNHVINPAMVHFLFKRMLDE
DCELLYLSDRPEKLMMVNIAVPPIPIRPSVIADGDRSNENDITERLKRVVQVNASLQQEL
LEANCAARLSGWDDLQVEVAQYINSDVRGGPFAMQVAKPMGGFVQRLKGKQGRFRGNLSG
KRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVSYHNIEKLRQCVSNGPDKYPGA
RMLRRADGSQWNLNVARKRRADELKYGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARV
MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVA
STQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHIDLPTPAVIKPVELWTGKQLFSI
LVRPDANVRVFLNLTVREKNYTKLLVNGREIEALCPNDGFVYFRNSELISGQLGKATLGN
GNKDGLYFVLLRDYKTHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPSKRLHDQKQELI
LEGYGKCDEKINLYNEGSLPPEPGCNAAQTLEAKISQILNGIRDATGKLCMQELHWRNSP
LIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFHRNQKTPGAKGFVANS
FYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKAMEDLCVHYDDAVRNASGCI
VQFRYGDDNMDPANMEGKNGAPLNFERLFLKAKATCPAGENEKLSPEKVSEIVESRISQQ
DMTPEWGCSLAFKTSLKCFLDEYVMALKRTQERFGLIESLAAMENFETVEKIVLHISGVT
ARQLEVFLDTCISRYHMKKIEPGTAIGAIGGHSIGEPGTQMTLKTFHFAGVASMNITQGV
PRIKEIINAAKKISTPVITATLECDDNVNVARVVRGRIEKTRLCDVAKTLKTVMTNRSAA
IVITLDMDMIQDAQLSIDANVVQESILKTPKIKLKQEHIKVLEVKKLEILPQEVDRSKIH
FNLNYLKSILPTVIVKGIKTIERVIIKKEEDKKTQMSKCKLLVEGTGLLDVMGTEGVDGR
NTTSNHIIEVYQTLGIEAARKCIINEIEETMKSHGMSIDNRHMMLLADVMTFRGEVLGIN
RFGIQNMDKSILMLASFEKTADHLFNASVNGRVDNIEGVSESIIMGMPVQIGTGLFKVKQ
RVDVPSDLCYGPDPILRS
NT seq 4197 nt   +upstreamnt  +downstreamnt
atggcggcggtggcgaacagagaccaaactcaaagcattgtattcaccaagcagctcttc
atcgaagatgtggggccgcggcgattaaaaagcatgcagtttaccactctttctgggtcg
gaaatcagcaaattggccgaagttcaagtgtggaaaggccaatattatgattccaatcgg
aaaccaatagaaaacggcttattggatccccggatgggtcctccaaataagaactccaaa
tgtgcaacatgccatggcagttatgctgagtgtccaggtcactacggatacttgaagctg
gctcttcctgtttataatgttggttatataagcagtatagttgatattttgaagtgtatt
tgtaagaactgttctcgtatacttttggaggatgaacgacgtcaaaagcttttgaagaag
atgagaagtcctaagatggatgctttgaagaagactagactgatgaaggatatagtcaag
gacttgtcaaataaagcaataaagtgctatagatgtggatatgttaatggcaaagtgaag
aaaagtacagccagtcagggtgttaaaatttttcatgatcgttccagactttttgatggt
ttagaagactacaaatcagcaatttctcacataaaagattccaaaatatctttagatatg
tctaatcacgttattaaccctgctatggttcattttctgtttaaaaggatgcttgatgag
gactgtgagctgctttatctttctgatagaccagagaaactcatgatggtgaatattgct
gtgccgcctataccaatccgcccttctgttattgcagatggagatcggagcaatgaaaat
gacattaccgagcggttgaagcgagttgttcaagtgaatgctagtcttcaacaggagtta
ttagaagcaaattgtgcagcacgtctgtcgggatgggatgatcttcaagttgaggttgcc
caatacataaatagtgatgttcgtggtggtccttttgccatgcaagttgcaaagccgatg
ggtggttttgtccagcgtctcaaagggaagcaagggcgatttcgtgggaacttatcaggg
aagcgtgttgaatatactggcagaactgtcatctcacctgaccctaatctgaaaatcact
gaggttgcaatcccaatacatatggctagaatcttgacttatccagaacgagtttcctat
cacaatattgagaagttgaggcagtgtgtcagcaatggccctgataagtatcctggtgca
aggatgctaagacgtgcggatggttctcaatggaatttaaatgttgcaagaaagcgccgg
gcagatgaattaaaatatggtgatattgttgatcgtcatttagaagatggggacatcgtt
ctctttaacagacaaccaagcttgcatcggatgtctatcatgtgtcatagggcaagggtt
atgccttggagaactttacgctttaatgaatctgtgtgcaacccatataatgctgatttt
gacggtgatgaaatgaatatgcatgttccacaaacagaggaggctcgaacagaggcaatt
ctactgatgggggtgcaaaacaatttatgcacgccaaaaaatggagagattttggttgct
tctactcaagattttttaacatcttcttttctcatcacaaggaaggacacattttatgat
cgtgcagctttttctctcatgtgttcatacatgggggatggtatggatcatattgatttg
ccaacgcctgctgtaattaagcctgtagagctctggacagggaagcaattatttagcatt
ctagtgcgcccagatgcaaatgtgagagtctttttgaatctgactgttagggagaaaaac
tacaccaagctcctagtaaatggaagggaaattgaagcattatgccctaatgacgggttt
gtttatttccgtaacagtgagctgatatctgggcagcttgggaaggcaactttaggaaat
ggcaataaggatggactttactttgtacttctcagagactacaaaactcatgctgctgct
gcttgcatgaatcgcctggctaaattaagtgcacggtggattggtaatcatggattctca
attggaattgatgatgtccagccaagtaaaagattgcatgatcagaagcaagagctaatt
ttggaaggttatggtaaatgtgatgagaaaataaatttatataatgaaggaagtctacca
cctgaacctggatgtaatgctgctcagacactagaggctaaaatatcgcaaatattaaat
ggtatcagggatgcaactgggaagttgtgcatgcaagaattacattggagaaatagtccc
ttgatcatgtcccagtgtggttccaaaggatctcctatcaatatcagccaaatgattgcc
tgtgttggtcagcaatcagttggtggtcgtcgtgcacctgatggattcatagatcgaagc
cttcctcactttcatagaaatcaaaaaacccctggagctaaaggctttgttgctaattct
ttctacagtggcttgtcagctactgagtttttcttccatacaatgggagggcgagaaggt
ctagtggatacagcggtaaaaacagctgatactgggtacatgtctcgtagactgatgaaa
gctatggaagacttatgtgtccattatgacgatgcagtgcggaatgcaagtggatgcatt
gttcaattccgctatggagatgataatatggatcctgcaaatatggaagggaaaaatgga
gctcctttaaattttgaacggttatttttgaaagcaaaggccacatgtcctgctggagaa
aatgaaaaactatctcccgaaaaagtgtctgaaatagtggagagcaggatttcacaacaa
gatatgactcctgagtggggttgctctttagcctttaaaacttctctgaagtgtttcctg
gatgaatacgttatggcactaaaaagaacacaggaaagatttggattgattgaaagtctt
gctgcgatggaaaactttgaaactgtagaaaagattgtccttcatatatctggagtgact
gctagacaattagaggttttcctagatacgtgtatctcccgttatcatatgaaaaaaatt
gaacctggaactgctattggagcaattggaggccatagtattggagagccagggacgcag
atgacattaaaaacttttcactttgctggagttgcaagcatgaacattacacagggagtt
cctcgtattaaagaaataataaatgcagcaaaaaagatcagtactcctgtcatcactgca
actctcgagtgcgacgataatgttaatgttgcacgggtggtaagaggtcgaattgagaaa
acaaggctatgtgatgttgctaagactttaaagactgtaatgactaaccgatcagcagca
atagttatcacactggacatggacatgattcaggacgcacagttgtctatagatgctaat
gttgtacaagaatcaatcctaaaaacaccaaaaatcaaactgaagcaagagcatattaaa
gttttggaggttaagaaactagaaattcttccccaagaggtagatagaagtaaaatccat
tttaacctcaactatctcaaaagtattctcccaacagttatagtaaagggtataaaaact
attgagcgggtcattattaagaaagaagaagataaaaaaacacagatgagtaaatgcaag
ttactcgtagaaggaacgggtcttctagatgttatgggcacagaaggagtagatggccgt
aataccacaagtaatcatatcattgaagtatatcagacacttgggattgaagcagcgagg
aaatgtatcattaatgagatagaagaaactatgaaaagtcatggaatgagcatagataat
cggcatatgatgcttctggcagatgtaatgacatttaggggagaggtccttggaatcaac
agatttggcattcaaaatatggacaaaagcatattgatgttagcttcatttgagaagacg
gcagatcatttattcaatgcttctgtaaatggaagagttgacaatattgaaggagtttct
gaatccataatcatgggtatgccagtgcagataggcaccggattgttcaaagttaaacaa
agagttgatgtgccttcagatctttgttatggtccggatccgattttacggagttga

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