KEGG   Ziziphus jujuba (Chinese jujube): 107411291
Entry
107411291         CDS       T04794                                 
Name
(RefSeq) uncharacterized protein LOC107411291
  KO
K10643  CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107411291
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:zju03000]
    107411291
   03019 Messenger RNA biogenesis [BR:zju03019]
    107411291
   04121 Ubiquitin system [BR:zju04121]
    107411291
Enzymes [BR:zju01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107411291
Transcription factors [BR:zju03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    107411291
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107411291
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     107411291
Ubiquitin system [BR:zju04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107411291
SSDB
Motif
Pfam: zf-RING_4 RRM_1 Baculo_IE-1 Nab2-like_zf-CCCH_ Rtf2 zf-RING_2 zf-UDP
Other DBs
NCBI-GeneID: 107411291
NCBI-ProteinID: XP_048323727
UniProt: A0A6P6FY14
LinkDB
Position
10:complement(join(11697928..11698496,11698800..11698913,11699660..11701191,11701271..11701350,11701972..11702110,11702755..11702846,11702954..11703002,11703099..11703182,11704224..11704333,11704430..11704583,11704679..11704806,11705055..11705147))
AA seq 1047 aa
MSDEGEKTCPLCAEEMDYTDQQLKPCKCGYEICVWCWHHIMDMAEKEDTEGRCPACRTAY
DKEKIVGTAANCERLVAEINMERKAKSQKSKGKTSEGRKQLSSVRVIQRNLVYIVGLPLN
LADEELLQRREYFGQYGKVLKVSMSRTAAGVIQQFPNNTCSVYITYSKEEEAIRCIQNVH
GFVLEGRSLRACFGTTKYCHAWLRNVPCTNPDCLYLHEIGSQEDSFTKDEIISAYTRSRV
QQITGAANNVQRRSGNVLPPPVDDSWNSSSGSSGKPIVKNGSTNSGSIIKGSPPNGGSGR
SIALPAAASWGTRGSNCQPPVANFTCSNGPSKQKPDTVSSPLAFSSAVAGTTQASLLDSD
GGKTQSLIEASQYVHAKVNQESVKPVRELSLDCQTNLSEKPASLDGASAAINLSNQFSCS
PVSKDDDRGINMAANISNATDLDGQSCTSVHEIEQIVTTDDRVQKLCSQVSSLSIDRNGM
DDHSGITRLSNSISDNALIKSSQNQDLQQYYADQSREPSSITQKTATSTNGVYISRDKCE
WLSDSQTQAVPNIFPELEEDIISFDNQRLKDPEVVSHSTYLPNSVNVLHSSNHFRSPSQQ
RESYGVANMSADHLYTDSKVRDGSILSGSSVSATPNGYLRNLAASSACSDRALENTLMHP
DEGSGKNIGRFLGDAADVEIDAVVDKKGESSIISNILSLDFDSWDESLTSPQNLAKLLGD
NDKQTGSHKISSSWKPQTNSQSRFSFARQEESINQVFDVQPSLNAFSQLSNNHPFSRDLA
ENRDLYSDKLGIGNGFLSSNFEESEIHASNHSAFSSSKLSAVSRAQISAPPGFSVPSRAP
PPGFASHERVDQAFDTLSGNRLLDATMLRNAYQPQATANVVNTADIEFMDPAILAVGKGR
LQGGLNSPALEIRSNFPSQLSPFENDARLQLLMQRSLASQQNLRFPDFGDNFSHLSDSYG
ISSRLVDQSPVNSLSPFAQMSLQQSRNGMMSNGHWDGWNEVQGGSTLGMAELMRNERLGF
NKFYAGYEDSKFRMPSSGDLYNRNFGM
NT seq 3144 nt   +upstreamnt  +downstreamnt
atgagtgatgagggagaaaagacttgtcctctctgtgctgaagagatggactatactgat
caacagctgaagccatgcaaatgtggttatgagatatgcgtttggtgttggcatcatata
atggacatggctgagaaggaagatacagaggggcgttgtcctgcatgtcgtacggcttat
gacaaggaaaagatagtagggacggctgcaaattgtgaaagattggtggctgaaatcaat
atggagagaaaagctaagtcacaaaagtctaagggaaaaacatcagaaggacggaaacag
cttagtagcgtgcgcgttattcaaagaaaccttgtctacatagttgggttgcctcttaat
ctggcagatgaagaacttctccagcgtagagaatattttggtcaatatgggaaggttctc
aaagtttctatgtctcggacagcagctggtgtcatccagcagtttccgaacaatacatgt
agtgtatatattacatactcaaaagaggaggaagctattcgttgcattcaaaatgtacat
ggatttgttttggagggtcgatctttgagggcgtgctttggaaccacaaagtattgtcat
gcatggctgaggaatgtgccttgcactaatcctgattgtctgtatttgcatgagattggt
tctcaagaggatagtttcaccaaagatgaaattatatcagcatacacaaggagtagagtt
caacaaattactggtgctgcaaacaatgtacaacggcgttcagggaatgtgttgccacct
cctgtagatgattcttggaacagcagttctggttcctctggaaagcctattgtgaagaat
ggttctactaattctggaagtattattaaaggttctcctccaaatggaggctctggtaga
tctatagctcttccagcagcggcctcatggggaacacgtggttcaaattgccaaccacca
gttgctaattttacatgttcaaatggaccttctaaacagaaacctgacactgttagtagt
ccattggcattttcatcagcagttgcaggcactactcaggcgtctctattggatagtgat
ggagggaagacgcagtcattgattgaagcaagtcagtatgtgcatgctaaagttaatcaa
gaatcagtgaagcctgtgagagagcttagtttggattgtcaaacaaatttgtctgaaaaa
cctgcttcacttgatggtgcttctgctgccataaatttgagcaaccagttttcatgttca
ccagtatcgaaggatgatgatagaggcattaatatggctgcaaacatttcaaatgccact
gacctagatgggcagtcttgtacttctgttcatgaaatagaacagatagttactactgat
gatcgggtccagaaattatgctctcaagtttcttcgttgagcattgatagaaatgggatg
gatgaccattctggaataacaaggttgagtaattcaatttctgataatgcccttatcaaa
tcatcacagaatcaagatttgcagcaatattatgctgatcaatctagagaaccttcatca
attactcagaaaactgctacatcaactaatggggtttacatttcaagagataaatgtgaa
tggttatcagattcacaaacacaagcggtgccaaatatatttcccgagttggaagaggat
ataatatcctttgataatcaacgacttaaagatcctgaagttgtgagtcatagtacttat
ttgcctaattcagttaatgtactccatagttccaatcactttaggtctccttcgcagcaa
cgcgagtcgtatggtgtagctaatatgagtgctgatcatctatacacggatagcaaagtt
agggatggttcaattctatctggctctagtgtttcagctacacctaatggctaccttcgg
aacttggcggctagttctgcttgttcagaccgagccttagagaataccttaatgcatcca
gatgagggttctgggaaaaacattggaagattcctgggtgatgcagctgatgttgaaatt
gatgctgttgtagataaaaaaggagaaagcagcataatctctaatatattatcattggat
tttgattcctgggatgaatcgttgacttcacctcagaatttggctaaattgctgggtgat
aatgataagcaaactggatcccataaaatttctagttcttggaaaccgcaaactaatagt
cagtccaggttctcttttgcaaggcaagaggaatctataaatcaagtatttgatgtacag
ccatctcttaatgccttcagtcaattgtcaaacaaccatcctttcagccgtgatttggct
gaaaacagagatttatattctgataagcttgggatcggtaatggtttcttatccagtaac
tttgaagaatctgaaatccatgccagtaatcactcagctttctcttcttctaagctttct
gcagtttcgagagctcaaatttcagctccacctggattttcggtgccaagccgggcacca
cccccaggatttgcatctcatgagagggttgaccaggcttttgataccctatctggaaac
cgattgcttgatgctactatgttgagaaatgcatatcaaccgcaggcaactgcaaatgtg
gttaacactgctgatattgagtttatggatcctgcaatactggcagttggtaaagggagg
cttcaaggtgggctcaacagccctgccttagaaattagatcaaatttcccttctcaattg
agcccctttgaaaatgatgctaggcttcaacttctgatgcaaagatcccttgcctcacaa
cagaacctaagatttcctgattttggagataatttttctcatctcagtgattcttatgga
atttcttctaggcttgttgatcaatctccagtgaatagtctatctccctttgcacaaatg
tccctccaacagtctagaaatgggatgatgtcaaatggccactgggatgggtggaatgag
gttcaaggtgggagcactttgggtatggcagagctcatgaggaatgagagactgggattc
aacaagttctatgctggttatgaagattcaaagtttcggatgcccagttcaggcgatcta
tacaacagaaactttgggatgtaa

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