Ziziphus jujuba (Chinese jujube): 107411383
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Entry
107411383 CDS
T04794
Name
(RefSeq) plant-specific TFIIB-related protein PTF2 isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zju03021
]
107411383
Transcription machinery [BR:
zju03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
107411383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
DUF4143
GATA
Motif
Other DBs
NCBI-GeneID:
107411383
NCBI-ProteinID:
XP_015874450
UniProt:
A0A6P3ZLL1
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Position
1:4674817..4676421
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AA seq
534 aa
AA seq
DB search
MSSSNSCTSCKSKSLVRDDVTGNLVCDSCGLLQEFDSYEANYGGIAGPEGTFVRVGTSGT
GSVLDYKEKKIYEAQKLIQDIMYRLELSGSKSKDVTAMVSAITEGEFGQGQWLTVLIGAC
AYVVMRKDNRSLPIAEVASVIGCDDHELGRMVLRVVDHLNLKQPDFPEFDIVGSFERALK
ESPSFVGVGKETAERMRKQGIFLMQCAVKWFLTTGRKPLPVVAAVLVLVAKLNHVDVRIE
NVAKQVHAVVHTSKLRYKELLEELVKVAQALPWGKDVTRKNIVKNAPFVIQYMEKKSMSK
PGEKRKDLVNGGFDLEGVVSECLSKEIEYGTDGSYVEDDSRYFEVEDFSRFALHGVDDVE
KLKLSPECLSMIYKKFSNEIENAKSGGEIEEFHGRKKWGFEDLAYEWWNGKSELSKKLLL
KQILDNEVGLDALPPSFENGCRAYERRREKINAAKLRINRIMNPSNPNPCDDYSFSTSEN
IQARKKRKRGQTEGIDWEDLIIEKLLLHKVKEEEIEKGYYNTLLDLYVFNSGIV
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagttccaactcctgcacgagttgcaaatcaaagtccttggtccgggacgacgtc
accggcaatctagtctgcgattcgtgcggtcttcttcaagaattcgacagctacgaggcc
aactacggcggcatcgccggaccagaaggaacattcgtccgcgtggggacctcaggtacg
ggaagtgttctcgattacaaggaaaagaaaatctatgaggctcagaaattaatccaagac
attatgtataggttggaattatcgggctccaaatccaaagacgtcacggctatggtctcg
gccattacggaaggcgaattcggtcaaggccaatggctgaccgtcttgatcggcgcctgt
gcttatgtcgtcatgaggaaggacaaccggtcgttgccgatcgccgaggtggcttctgta
atcggctgcgatgaccacgagctaggtaggatggttttgcgtgttgttgatcatctgaat
ctgaagcagcccgatttccccgaattcgacatagtcggttcgtttgagagggcgctgaag
gagtcgccgagtttcgtcggtgttgggaaagaaacggccgagagaatgcgtaagcagggg
atttttctgatgcagtgtgcggtgaagtggttcttgaccaccggtcggaaaccactgcct
gtggtggccgcggtgttggtcttggtggcgaagttgaatcatgttgatgttagaattgag
aatgtagcgaagcaagtccatgccgtggttcacactagtaaattgaggtataaggagctt
ttggaagagcttgtgaaggtcgctcaagcattgccttgggggaaggatgttactaggaaa
aatattgttaagaatgctccttttgtgattcagtatatggagaagaagtccatgtcaaag
cctggtgagaagaggaaggatttggtgaatggtgggtttgatttggaaggtgtggttagt
gagtgtttgagtaaagaaattgagtatgggactgatgggtcttatgtggaagatgattca
aggtattttgaggtagaagattttagtaggttcgcattacatggcgttgatgatgtggag
aagctgaaactttctcctgaatgcttatccatgatctataaaaaattttcaaatgagata
gagaatgcaaaatctggtggagagattgaagagtttcatggaaggaaaaagtggggtttt
gaggatcttgcctatgagtggtggaatggaaaatcagagttgagcaaaaaacttttactc
aagcaaatattggataacgaggtaggattggatgctttgcccccttcttttgagaatgga
tgcagggcttatgagaggaggagagaaaagataaatgctgctaagctccgcatcaataga
attatgaatccatcaaatcctaatccatgtgacgactacagcttttctacttcagaaaat
atacaagctagaaagaagagaaaaagaggacaaaccgaaggcattgattgggaagatttg
attatagaaaagcttctccttcataaggtaaaagaggaggaaatagagaaaggttattat
aacaccttattggacttgtacgtgttcaactctggaattgtttga
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