KEGG T04794: 107411477

Ziziphus jujuba (Chinese jujube): 107411477

Entry

107411477         CDS       T04794

Name

(RefSeq) ruBisCO large subunit-binding protein subunit alpha

K04077

chaperonin GroEL [EC:5.6.1.7]

Organism

zju Ziziphus jujuba (Chinese jujube)

Pathway

zju03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:zju00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107411477
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107411477
   03110 Chaperones and folding catalysts [BR:zju03110]
    107411477
   03029 Mitochondrial biogenesis [BR:zju03029]
    107411477
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zju04147]
    107411477
Enzymes [BR:zju01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     107411477
Messenger RNA biogenesis [BR:zju03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     107411477
Chaperones and folding catalysts [BR:zju03110]
Heat shock proteins
  HSP60 / Chaperonin
   107411477
Mitochondrial biogenesis [BR:zju03029]
Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    107411477
Exosome [BR:zju04147]
Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107411477
  Exosomal proteins of other body fluids (saliva and urine)
   107411477
  Exosomal proteins of breast cancer cells
   107411477
  Exosomal proteins of colorectal cancer cells
   107411477
  Exosomal proteins of bladder cancer cells
   107411477

SSDB

Motif

Pfam:

Cpn60_TCP1 Ribosomal_L29

Other DBs

NCBI-GeneID:

107411477

NCBI-ProteinID:

XP_015874553

UniProt:

A0A6P3ZAU2

LinkDB

Position

10:join(16664163..16664216,16664711..16664891,16665180..16665301,16665455..16665662,16665750..16665895,16665995..16666301,16666871..16667322,16667425..16667715)

AA seq 586 aa
MASANAISSASILCSPKQSLTRRVNQQKSNRLNYKQSSGRFVVRANAKDIAFDQNSRAAL
QSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREV
ASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVQGLVEELEKKSRA
VKGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVAVEEGMEIDR
GYISPQFVTNPEKLIAEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIVAEDVTGE
ALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQL
GLARKVTISKDSTTLIADAASKDELQARIAQLKKELFETDSVYDSEKLAERIAKLSGGVA
VIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTAFVHLSSSVPAIKDRLEDAD
ERLGADIVQKALVAPASLIAQNAGIEGEVVVEKIKVGEWEVGYNAMTDKYENLVEAGVID
PAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAPVAVPQPGQLVV

NT seq 1761 nt +upstreamnt +downstreamnt
atggcgtccgccaatgctatttcctctgcatctattctctgctcccccaagcagagcttg
acgaggagggttaatcaacagaagagtaataggcttaactacaagcaatccagcgggcgg
tttgttgtaagggccaatgcaaaggatattgcttttgaccagaactcgagagccgcactt
cagagcggcattgataagcttgccgatgctgttggccttactcttggtcctagggggaga
aatgtcgtcttggatgaatttggaagtcctaaagtagttaatgatggagtaacaatagct
cgggctattgagctgcctgatccaatggaaaatgctggtgcagctctcataagggaggtt
gctagtaagacaaacgactctgctggagatgggacaacaactgcatcagttcttgcaagg
gaaataatcaagctagggcttttaagtgtaacttctggtgcaaatcctgtgtcactaaag
agggggattgacaaaactgtacaggggttagtagaagagctagagaagaagtctagggct
gtaaaaggacgcgatgatatcaaagctgttgctaccatttctgctgggaatgatgaactt
attggaactatgattgctgatgctattgacaaggttgggcctgatggtgttttgtccatc
gagtcatcatcgtcatttgagacaactgttgcagtagaagaaggaatggagattgacaga
ggctatatctcccctcagtttgttacaaaccctgagaaattgattgctgaatttgaaaat
gcaagggtcttggttacagatcagaagatttcagcaatcaaggacataattcccctgtta
gagaagaccactcaactgagagctcctttgctcattgttgctgaggatgtcactggagaa
gctttggcaactcttgttgtcaataagttgcgtggtatacttaatgttgctgcaatcaag
gctcctggttttggtgagaggagaaaggcgctactccaagatattgccattttgacaggg
gccgagtttcaagcaagtgatctgggtctcctcgttgagaacacctcagttgagcagctt
ggtttagccagaaaagtgaccatctccaaggactccaccacccttattgctgatgctgca
tcaaaagatgagttacaagctaggattgcacagctgaaaaaagagttgtttgagacagat
tctgtttacgattctgagaaactagctgagagaatagccaaattgtcaggcggggttgct
gtcataaaggtaggtgctgctactgagacagaacttgaggaccgtaagcttcgcattgag
gatgccaagaatgctacttttgctgctattgaggaagggattgtgcctggtggtggtact
gcttttgtgcatctctcttcttctgtccctgcaatcaaggacaggcttgaagatgcagat
gagcgactgggagctgacatagttcagaaggcattggtggcaccagcatcattaatagct
caaaatgcagggattgaaggcgaagtggtggtggagaaaataaaagtgggtgaatgggag
gttggttacaatgcaatgacagacaagtatgagaacctcgtggaggctggtgttattgac
ccagcaaaggtcacaagatgtgccctgcagaatgcagcttcagttgctggaatggtcttg
accactcaagccattgtggtcgaaaaaccgaagcccaaggcacctgtagctgttccccag
ccaggacagcttgttgtgtga

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